Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETREG2Q8NC44 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.16■■□□□ 1.14
RETREG2Q8NC44 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 AL445228.2-201ENST00000605589 952 ntBASIC22.15■■□□□ 1.14
RETREG2Q8NC44 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETREG2Q8NC44 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RETREG2Q8NC44 DPP3P2-201ENST00000416030 1696 ntBASIC22.14■■□□□ 1.14
RETREG2Q8NC44 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RETREG2Q8NC44 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 AC124283.5-201ENST00000624661 1809 ntBASIC22.14■■□□□ 1.13
RETREG2Q8NC44 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RETREG2Q8NC44 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 ARMC10P1-201ENST00000313754 855 ntBASIC22.13■■□□□ 1.13
RETREG2Q8NC44 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 AP002982.1-201ENST00000492365 877 ntBASIC22.13■■□□□ 1.13
RETREG2Q8NC44 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RETREG2Q8NC44 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 AC005363.2-201ENST00000618631 242 ntBASIC22.12■■□□□ 1.13
RETREG2Q8NC44 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RETREG2Q8NC44 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 UNC93B2-201ENST00000285383 730 ntBASIC22.11■■□□□ 1.13
RETREG2Q8NC44 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms