Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 AL441883.1-201ENST00000566170 1045 ntBASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 AC116407.4-201ENST00000623319 1061 ntBASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC44A3Q8N4M1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 AC005332.1-201ENST00000577698 1310 ntBASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 PRSS44-201ENST00000515154 1146 ntBASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 AL023973.1-201ENST00000624619 620 ntBASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A3Q8N4M1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 TMEM179-206ENST00000616017 1645 ntBASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A3Q8N4M1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 CA15P1-201ENST00000481698 905 ntBASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SLC44A3Q8N4M1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 HCG4P8-203ENST00000443049 980 ntBASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC44A3Q8N4M1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms