Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 AC117947.1-201ENST00000427448 529 ntBASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 AL157384.1-201ENST00000445995 2473 ntBASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 INGX-201ENST00000359239 846 ntBASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 FAM207BP-201ENST00000447172 505 ntBASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 MYC-208ENST00000641036 567 ntBASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPOQ8N3V7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 PLK5-205ENST00000642079 1969 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 UPK3BP1-201ENST00000428678 509 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 AL512604.3-201ENST00000569583 964 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 HLA-A-209ENST00000638375 975 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 PHGDH-210ENST00000641115 1638 ntBASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPOQ8N3V7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 AL358472.4-201ENST00000633140 710 ntBASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNPOQ8N3V7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms