Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 AC120498.9-201ENST00000339021 3867 ntBASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRTM1Q86UE6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 TEX21P-204ENST00000641479 1693 ntBASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 AC005082.1-201ENST00000413042 2259 ntBASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 AC141586.3-201ENST00000562166 1838 ntBASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 AC023632.3-201ENST00000521633 145 ntBASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRTM1Q86UE6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRTM1Q86UE6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms