Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
YTHDF3Q7Z739 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YTHDF3Q7Z739 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 AC124067.4-201ENST00000519691 2379 ntBASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 MIR3181-201ENST00000578512 73 ntBASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
YTHDF3Q7Z739 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YTHDF3Q7Z739 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 FP475955.4-201ENST00000623131 1990 ntBASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
YTHDF3Q7Z739 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.32■□□□□ 0.68
YTHDF3Q7Z739 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms