Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 AC069236.1-201ENST00000604339 616 ntBASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 AC120498.10-201ENST00000621827 505 ntBASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 AC099398.1-201ENST00000567919 2776 ntBASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR1Q6PIV2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 BX276092.2-201ENST00000417668 665 ntBASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 ITM2C-210ENST00000620962 501 ntBASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
FOXR1Q6PIV2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR1Q6PIV2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 AP006587.3-201ENST00000525742 1516 ntBASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.27■□□□□ 0.83
FOXR1Q6PIV2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 AC135050.7-201ENST00000624508 2218 ntBASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 EEF1DP3-203ENST00000566025 782 ntBASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 AC053503.5-201ENST00000601508 636 ntBASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 OR10C1-204ENST00000622521 1039 ntBASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms