Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 AL355355.2-201ENST00000442321 338 ntBASIC23.24■■□□□ 1.31
CTR9Q6PD62 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.24■■□□□ 1.31
CTR9Q6PD62 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 KRT16P1-201ENST00000399124 1418 ntBASIC23.24■■□□□ 1.31
CTR9Q6PD62 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTR9Q6PD62 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.23■■□□□ 1.31
CTR9Q6PD62 NUDT16P1-203ENST00000513809 620 ntBASIC23.23■■□□□ 1.31
CTR9Q6PD62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 AL445675.2-201ENST00000620291 557 ntBASIC23.23■■□□□ 1.31
CTR9Q6PD62 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTR9Q6PD62 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
CTR9Q6PD62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 HLA-A-209ENST00000638375 975 ntBASIC23.22■■□□□ 1.31
CTR9Q6PD62 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 KRT8P8-201ENST00000434750 1448 ntBASIC23.22■■□□□ 1.31
CTR9Q6PD62 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CTR9Q6PD62 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTR9Q6PD62 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.21■■□□□ 1.31
CTR9Q6PD62 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 REXO1L10P-201ENST00000615707 1290 ntBASIC23.21■■□□□ 1.31
CTR9Q6PD62 REXO1L12P-201ENST00000622156 912 ntBASIC23.21■■□□□ 1.31
CTR9Q6PD62 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.21■■□□□ 1.31
CTR9Q6PD62 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTR9Q6PD62 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CTR9Q6PD62 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.2■■□□□ 1.3
CTR9Q6PD62 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 BX088651.1-201ENST00000540551 451 ntBASIC23.2■■□□□ 1.3
CTR9Q6PD62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.2■■□□□ 1.3
CTR9Q6PD62 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTR9Q6PD62 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms