Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.76□□□□□ -0.05
MRPL54Q6P161 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
MRPL54Q6P161 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL54Q6P161 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 FER1L4-210ENST00000615531 5998 ntBASIC14.75□□□□□ -0.05
MRPL54Q6P161 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 NOC2LP1-202ENST00000452600 2235 ntBASIC14.75□□□□□ -0.05
MRPL54Q6P161 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPL54Q6P161 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.75□□□□□ -0.05
MRPL54Q6P161 AC068880.1-201ENST00000507289 2297 ntBASIC14.75□□□□□ -0.05
MRPL54Q6P161 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 NOC2LP2-201ENST00000407594 1944 ntBASIC14.74□□□□□ -0.05
MRPL54Q6P161 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 WIZP1-201ENST00000531444 2299 ntBASIC14.74□□□□□ -0.05
MRPL54Q6P161 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPL54Q6P161 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPL54Q6P161 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms