Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 AC009947.2-201ENST00000444014 672 ntBASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 AL138966.2-201ENST00000621997 464 ntBASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTC1Q2NKJ3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 AC097488.1-201ENST00000507834 756 ntBASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 AP000550.4-202ENST00000639755 178 ntBASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTC1Q2NKJ3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 RNF152P1-201ENST00000397754 604 ntBASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.9■□□□□ 0.94
CTC1Q2NKJ3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CTC1Q2NKJ3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 HMGA1P5-201ENST00000412453 271 ntBASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CTC1Q2NKJ3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 AC004980.1-204ENST00000429707 299 ntBASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 KRT18P48-201ENST00000434763 852 ntBASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms