Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN20P56880 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN20P56880 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN20P56880 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN20P56880 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN20P56880 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN20P56880 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN20P56880 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN20P56880 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN20P56880 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN20P56880 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 GCSHP5-201ENST00000443090 522 ntBASIC17.9■□□□□ 0.46
CLDN20P56880 AL158047.1-201ENST00000445918 881 ntBASIC17.9■□□□□ 0.46
CLDN20P56880 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CLDN20P56880 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 AC142381.4-202ENST00000563973 229 ntBASIC17.9■□□□□ 0.46
CLDN20P56880 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN20P56880 MTDHP1-201ENST00000605323 784 ntBASIC17.9■□□□□ 0.46
CLDN20P56880 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 AC099778.1-201ENST00000568593 1911 ntBASIC17.9■□□□□ 0.46
CLDN20P56880 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN20P56880 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN20P56880 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN20P56880 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.46
CLDN20P56880 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN20P56880 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN20P56880 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLDN20P56880 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN20P56880 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.89■□□□□ 0.45
CLDN20P56880 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 C1QBPP2-201ENST00000528754 825 ntBASIC17.89■□□□□ 0.45
CLDN20P56880 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.89■□□□□ 0.45
CLDN20P56880 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN20P56880 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN20P56880 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN20P56880 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN20P56880 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLDN20P56880 BX119927.1-201ENST00000636596 1552 ntBASIC17.88■□□□□ 0.45
CLDN20P56880 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN20P56880 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN20P56880 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN20P56880 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN20P56880 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN20P56880 RPPH1-201ENST00000516869 333 ntBASIC17.88■□□□□ 0.45
CLDN20P56880 AL023875.1-201ENST00000640777 796 ntBASIC17.88■□□□□ 0.45
CLDN20P56880 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN20P56880 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN20P56880 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN20P56880 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN20P56880 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms