Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3P56703 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3P56703 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3P56703 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
WNT3P56703 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3P56703 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
WNT3P56703 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.49■□□□□ 0.55
WNT3P56703 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
WNT3P56703 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
WNT3P56703 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
WNT3P56703 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
WNT3P56703 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.48■□□□□ 0.55
WNT3P56703 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
WNT3P56703 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 LINC01465-201ENST00000408887 1940 ntBASIC18.48■□□□□ 0.55
WNT3P56703 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
WNT3P56703 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
WNT3P56703 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
WNT3P56703 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3P56703 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT3P56703 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 AC093503.3-201ENST00000624917 2352 ntBASIC18.47■□□□□ 0.55
WNT3P56703 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
WNT3P56703 AC124283.5-201ENST00000624661 1809 ntBASIC18.47■□□□□ 0.55
WNT3P56703 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 AL390719.1-204ENST00000412397 1219 ntBASIC18.47■□□□□ 0.55
WNT3P56703 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
WNT3P56703 AC006557.6-201ENST00000623071 864 ntBASIC18.47■□□□□ 0.55
WNT3P56703 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.47■□□□□ 0.55
WNT3P56703 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3P56703 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.47■□□□□ 0.55
WNT3P56703 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.46■□□□□ 0.55
WNT3P56703 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.46■□□□□ 0.55
WNT3P56703 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
WNT3P56703 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.46■□□□□ 0.55
WNT3P56703 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3P56703 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3P56703 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.46■□□□□ 0.55
WNT3P56703 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
WNT3P56703 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
WNT3P56703 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
WNT3P56703 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.45■□□□□ 0.54
WNT3P56703 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.45■□□□□ 0.54
WNT3P56703 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.45■□□□□ 0.54
WNT3P56703 POU5F1P3-201ENST00000428824 1078 ntBASIC18.45■□□□□ 0.54
WNT3P56703 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.45■□□□□ 0.54
WNT3P56703 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.45■□□□□ 0.54
WNT3P56703 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.45■□□□□ 0.54
WNT3P56703 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3P56703 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3P56703 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
WNT3P56703 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3P56703 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3P56703 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms