Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDH4P55283 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 SNORA78-201ENST00000459373 127 ntBASIC20.02■□□□□ 0.8
CDH4P55283 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH4P55283 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH4P55283 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH4P55283 CD177P1-201ENST00000606252 935 ntBASIC20.02■□□□□ 0.8
CDH4P55283 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH4P55283 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH4P55283 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.02■□□□□ 0.79
CDH4P55283 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CDH4P55283 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH4P55283 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDH4P55283 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH4P55283 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH4P55283 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH4P55283 AL445675.2-201ENST00000620291 557 ntBASIC20.01■□□□□ 0.79
CDH4P55283 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH4P55283 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH4P55283 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH4P55283 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH4P55283 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDH4P55283 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 FAM197Y1-201ENST00000421178 764 ntBASIC20■□□□□ 0.79
CDH4P55283 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20■□□□□ 0.79
CDH4P55283 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20■□□□□ 0.79
CDH4P55283 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20■□□□□ 0.79
CDH4P55283 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20■□□□□ 0.79
CDH4P55283 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20■□□□□ 0.79
CDH4P55283 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20■□□□□ 0.79
CDH4P55283 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 CR392000.1-201ENST00000624770 1228 ntBASIC20■□□□□ 0.79
CDH4P55283 HLA-A-209ENST00000638375 975 ntBASIC20■□□□□ 0.79
CDH4P55283 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH4P55283 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20■□□□□ 0.79
CDH4P55283 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 KRT16P1-201ENST00000399124 1418 ntBASIC20■□□□□ 0.79
CDH4P55283 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20■□□□□ 0.79
CDH4P55283 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDH4P55283 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH4P55283 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH4P55283 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CDH4P55283 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDH4P55283 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH4P55283 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 TSPY7P-201ENST00000431358 1114 ntBASIC19.99■□□□□ 0.79
CDH4P55283 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH4P55283 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH4P55283 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.99■□□□□ 0.79
CDH4P55283 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH4P55283 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CDH4P55283 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH4P55283 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH4P55283 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDH4P55283 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH4P55283 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDH4P55283 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH4P55283 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDH4P55283 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms