Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
MTHFRP42898 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
MTHFRP42898 AC005229.4-201ENST00000610085 2198 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.47■□□□□ 0.87
MTHFRP42898 KRT18P48-201ENST00000434763 852 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 AC007663.1-201ENST00000438948 1240 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 AC008040.2-201ENST00000461049 708 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.47■□□□□ 0.87
MTHFRP42898 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.47■□□□□ 0.87
MTHFRP42898 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.47■□□□□ 0.87
MTHFRP42898 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
MTHFRP42898 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.47■□□□□ 0.87
MTHFRP42898 AC141257.4-201ENST00000634557 245 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 AC136944.6-201ENST00000634818 245 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 AL031432.5-201ENST00000641059 760 ntBASIC20.47■□□□□ 0.87
MTHFRP42898 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
MTHFRP42898 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MTHFRP42898 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MTHFRP42898 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.47■□□□□ 0.87
MTHFRP42898 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.47■□□□□ 0.87
MTHFRP42898 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.47■□□□□ 0.87
MTHFRP42898 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.46■□□□□ 0.87
MTHFRP42898 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MTHFRP42898 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.46■□□□□ 0.87
MTHFRP42898 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.46■□□□□ 0.87
MTHFRP42898 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
MTHFRP42898 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.46■□□□□ 0.87
MTHFRP42898 AL121603.2-201ENST00000557373 2117 ntBASIC20.46■□□□□ 0.87
MTHFRP42898 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.46■□□□□ 0.87
MTHFRP42898 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.46■□□□□ 0.87
MTHFRP42898 HLA-A-209ENST00000638375 975 ntBASIC20.46■□□□□ 0.87
MTHFRP42898 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.46■□□□□ 0.87
MTHFRP42898 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.46■□□□□ 0.87
MTHFRP42898 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MTHFRP42898 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MTHFRP42898 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.45■□□□□ 0.86
MTHFRP42898 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.45■□□□□ 0.86
MTHFRP42898 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.45■□□□□ 0.86
MTHFRP42898 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.45■□□□□ 0.86
MTHFRP42898 TSPY17P-201ENST00000450329 467 ntBASIC20.45■□□□□ 0.86
MTHFRP42898 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.45■□□□□ 0.86
MTHFRP42898 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.45■□□□□ 0.86
MTHFRP42898 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
MTHFRP42898 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.45■□□□□ 0.86
MTHFRP42898 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.45■□□□□ 0.86
MTHFRP42898 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.45■□□□□ 0.86
MTHFRP42898 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MTHFRP42898 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MTHFRP42898 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MTHFRP42898 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.44■□□□□ 0.86
MTHFRP42898 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.44■□□□□ 0.86
MTHFRP42898 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
MTHFRP42898 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 PCED1CP-201ENST00000419887 785 ntBASIC20.44■□□□□ 0.86
MTHFRP42898 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 TPM4P1-201ENST00000436100 807 ntBASIC20.44■□□□□ 0.86
MTHFRP42898 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 HOMER2P1-201ENST00000455653 964 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms