Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A1P12107 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A1P12107 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A1P12107 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A1P12107 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A1P12107 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A1P12107 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 ATP5G1P1-201ENST00000448724 379 ntBASIC22.29■■□□□ 1.16
COL11A1P12107 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A1P12107 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A1P12107 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL11A1P12107 ARMC10P1-201ENST00000313754 855 ntBASIC22.29■■□□□ 1.16
COL11A1P12107 CCR12P-201ENST00000446203 998 ntBASIC22.29■■□□□ 1.16
COL11A1P12107 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.29■■□□□ 1.16
COL11A1P12107 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A1P12107 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A1P12107 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A1P12107 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.29■■□□□ 1.16
COL11A1P12107 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A1P12107 AL391422.3-201ENST00000603791 2761 ntBASIC22.28■■□□□ 1.16
COL11A1P12107 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A1P12107 AL162377.1-201ENST00000618844 1793 ntBASIC22.28■■□□□ 1.16
COL11A1P12107 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
COL11A1P12107 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A1P12107 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A1P12107 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.28■■□□□ 1.16
COL11A1P12107 AP003041.3-201ENST00000527151 707 ntBASIC22.28■■□□□ 1.16
COL11A1P12107 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A1P12107 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A1P12107 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A1P12107 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.27■■□□□ 1.16
COL11A1P12107 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.27■■□□□ 1.16
COL11A1P12107 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
COL11A1P12107 AC010653.2-201ENST00000623505 997 ntBASIC22.27■■□□□ 1.16
COL11A1P12107 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A1P12107 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.27■■□□□ 1.16
COL11A1P12107 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL11A1P12107 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL11A1P12107 AL137060.1-201ENST00000618151 2648 ntBASIC22.27■■□□□ 1.16
COL11A1P12107 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A1P12107 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A1P12107 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.27■■□□□ 1.15
COL11A1P12107 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
COL11A1P12107 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
COL11A1P12107 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.27■■□□□ 1.15
COL11A1P12107 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.27■■□□□ 1.15
COL11A1P12107 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.27■■□□□ 1.15
COL11A1P12107 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL11A1P12107 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A1P12107 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A1P12107 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A1P12107 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.26■■□□□ 1.15
COL11A1P12107 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL11A1P12107 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A1P12107 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A1P12107 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A1P12107 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
COL11A1P12107 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
COL11A1P12107 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A1P12107 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A1P12107 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A1P12107 TSPY17P-201ENST00000450329 467 ntBASIC22.25■■□□□ 1.15
COL11A1P12107 CA15P1-201ENST00000481698 905 ntBASIC22.25■■□□□ 1.15
COL11A1P12107 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A1P12107 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A1P12107 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A1P12107 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
COL11A1P12107 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A1P12107 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A1P12107 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A1P12107 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
COL11A1P12107 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL11A1P12107 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
COL11A1P12107 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.24■■□□□ 1.15
COL11A1P12107 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.24■■□□□ 1.15
COL11A1P12107 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
COL11A1P12107 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.24■■□□□ 1.15
COL11A1P12107 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.24■■□□□ 1.15
COL11A1P12107 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms