Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LAMP1P11279 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LAMP1P11279 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LAMP1P11279 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.52■□□□□ 0.56
LAMP1P11279 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.52■□□□□ 0.56
LAMP1P11279 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LAMP1P11279 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LAMP1P11279 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LAMP1P11279 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMP1P11279 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMP1P11279 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LAMP1P11279 AC004408.2-201ENST00000623613 2777 ntBASIC18.51■□□□□ 0.55
LAMP1P11279 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.51■□□□□ 0.55
LAMP1P11279 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMP1P11279 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMP1P11279 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMP1P11279 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMP1P11279 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMP1P11279 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMP1P11279 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.5■□□□□ 0.55
LAMP1P11279 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.5■□□□□ 0.55
LAMP1P11279 RPS2P52-201ENST00000469610 820 ntBASIC18.5■□□□□ 0.55
LAMP1P11279 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.5■□□□□ 0.55
LAMP1P11279 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.5■□□□□ 0.55
LAMP1P11279 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 MYC-209ENST00000641252 345 ntBASIC18.5■□□□□ 0.55
LAMP1P11279 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMP1P11279 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.5■□□□□ 0.55
LAMP1P11279 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LAMP1P11279 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.49■□□□□ 0.55
LAMP1P11279 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.49■□□□□ 0.55
LAMP1P11279 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 MIR4758-201ENST00000577688 71 ntBASIC18.49■□□□□ 0.55
LAMP1P11279 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.49■□□□□ 0.55
LAMP1P11279 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LAMP1P11279 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.49■□□□□ 0.55
LAMP1P11279 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
LAMP1P11279 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.48■□□□□ 0.55
LAMP1P11279 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.48■□□□□ 0.55
LAMP1P11279 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LAMP1P11279 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
LAMP1P11279 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMP1P11279 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.48■□□□□ 0.55
LAMP1P11279 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms