Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 AP000974.1-201ENST00000623909 2387 ntBASIC18.15■□□□□ 0.5
HNRNPCL4P0DMR1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HNRNPCL4P0DMR1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HNRNPCL4P0DMR1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.5
HNRNPCL4P0DMR1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
HNRNPCL4P0DMR1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 NCF1B-203ENST00000435988 1254 ntBASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HNRNPCL4P0DMR1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 MIR4758-201ENST00000577688 71 ntBASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HNRNPCL4P0DMR1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 TSPY6P-201ENST00000448518 926 ntBASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.12■□□□□ 0.49
HNRNPCL4P0DMR1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 GUSBP6-202ENST00000438529 1198 ntBASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 AC006557.6-201ENST00000623071 864 ntBASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms