Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBC1P01850 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TRBC1P01850 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.61■□□□□ 0.73
TRBC1P01850 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBC1P01850 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRBC1P01850 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 C1QL1P1-201ENST00000568105 661 ntBASIC19.61■□□□□ 0.73
TRBC1P01850 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBC1P01850 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.61■□□□□ 0.73
TRBC1P01850 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBC1P01850 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBC1P01850 AFG3L1P-217ENST00000557444 2447 ntBASIC19.61■□□□□ 0.73
TRBC1P01850 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBC1P01850 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBC1P01850 KRT8P8-201ENST00000434750 1448 ntBASIC19.6■□□□□ 0.73
TRBC1P01850 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBC1P01850 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
TRBC1P01850 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 HTR7P1-201ENST00000538670 1336 ntBASIC19.6■□□□□ 0.73
TRBC1P01850 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBC1P01850 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBC1P01850 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRBC1P01850 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBC1P01850 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBC1P01850 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.6■□□□□ 0.73
TRBC1P01850 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRBC1P01850 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBC1P01850 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRBC1P01850 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.59■□□□□ 0.73
TRBC1P01850 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBC1P01850 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRBC1P01850 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBC1P01850 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBC1P01850 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBC1P01850 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBC1P01850 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBC1P01850 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRBC1P01850 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBC1P01850 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TRBC1P01850 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBC1P01850 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBC1P01850 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBC1P01850 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBC1P01850 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRBC1P01850 AP006294.2-201ENST00000641667 209 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms