Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.22■□□□□ 0.99
TIMP1P01033 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.22■□□□□ 0.99
TIMP1P01033 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.22■□□□□ 0.99
TIMP1P01033 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.22■□□□□ 0.99
TIMP1P01033 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
TIMP1P01033 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.22■□□□□ 0.99
TIMP1P01033 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.22■□□□□ 0.99
TIMP1P01033 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
TIMP1P01033 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TIMP1P01033 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TIMP1P01033 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TIMP1P01033 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.21■□□□□ 0.99
TIMP1P01033 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.21■□□□□ 0.99
TIMP1P01033 GCSHP2-201ENST00000560971 527 ntBASIC21.21■□□□□ 0.99
TIMP1P01033 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.21■□□□□ 0.99
TIMP1P01033 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.21■□□□□ 0.99
TIMP1P01033 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.21■□□□□ 0.99
TIMP1P01033 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.21■□□□□ 0.99
TIMP1P01033 NPAP1P7-201ENST00000613027 823 ntBASIC21.21■□□□□ 0.99
TIMP1P01033 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.21■□□□□ 0.99
TIMP1P01033 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TIMP1P01033 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.2■□□□□ 0.99
TIMP1P01033 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
TIMP1P01033 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.2■□□□□ 0.98
TIMP1P01033 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TIMP1P01033 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.2■□□□□ 0.98
TIMP1P01033 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.2■□□□□ 0.98
TIMP1P01033 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.2■□□□□ 0.98
TIMP1P01033 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.2■□□□□ 0.98
TIMP1P01033 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TIMP1P01033 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TIMP1P01033 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.19■□□□□ 0.98
TIMP1P01033 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.19■□□□□ 0.98
TIMP1P01033 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TIMP1P01033 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
TIMP1P01033 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TIMP1P01033 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.19■□□□□ 0.98
TIMP1P01033 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.19■□□□□ 0.98
TIMP1P01033 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.19■□□□□ 0.98
TIMP1P01033 RN7SL510P-201ENST00000581311 263 ntBASIC21.19■□□□□ 0.98
TIMP1P01033 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
TIMP1P01033 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.19■□□□□ 0.98
TIMP1P01033 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TIMP1P01033 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 AC092720.2-201ENST00000602388 1665 ntBASIC21.18■□□□□ 0.98
TIMP1P01033 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.18■□□□□ 0.98
TIMP1P01033 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.18■□□□□ 0.98
TIMP1P01033 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
TIMP1P01033 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 FDX1P1-201ENST00000449115 551 ntBASIC21.18■□□□□ 0.98
TIMP1P01033 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.18■□□□□ 0.98
TIMP1P01033 MIR3652-201ENST00000579335 131 ntBASIC21.18■□□□□ 0.98
TIMP1P01033 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.18■□□□□ 0.98
TIMP1P01033 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TIMP1P01033 AC092119.3-201ENST00000612618 583 ntBASIC21.18■□□□□ 0.98
TIMP1P01033 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TIMP1P01033 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
TIMP1P01033 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.18■□□□□ 0.98
TIMP1P01033 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms