Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.66■□□□□ 0.9
ZBED1O96006 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZBED1O96006 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.66■□□□□ 0.9
ZBED1O96006 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
ZBED1O96006 AC004264.1-201ENST00000608354 794 ntBASIC20.66■□□□□ 0.9
ZBED1O96006 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
ZBED1O96006 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
ZBED1O96006 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZBED1O96006 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 YBX1P10-201ENST00000444752 975 ntBASIC20.65■□□□□ 0.9
ZBED1O96006 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 KRT16P5-201ENST00000455284 522 ntBASIC20.65■□□□□ 0.9
ZBED1O96006 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.65■□□□□ 0.9
ZBED1O96006 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.65■□□□□ 0.9
ZBED1O96006 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.65■□□□□ 0.9
ZBED1O96006 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.65■□□□□ 0.9
ZBED1O96006 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.65■□□□□ 0.9
ZBED1O96006 AP006294.2-201ENST00000641667 209 ntBASIC20.65■□□□□ 0.9
ZBED1O96006 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZBED1O96006 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZBED1O96006 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.65■□□□□ 0.9
ZBED1O96006 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.64■□□□□ 0.9
ZBED1O96006 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.64■□□□□ 0.89
ZBED1O96006 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZBED1O96006 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZBED1O96006 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ZBED1O96006 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZBED1O96006 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.64■□□□□ 0.89
ZBED1O96006 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.64■□□□□ 0.89
ZBED1O96006 AC066615.1-201ENST00000640911 628 ntBASIC20.64■□□□□ 0.89
ZBED1O96006 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZBED1O96006 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZBED1O96006 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZBED1O96006 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.64■□□□□ 0.89
ZBED1O96006 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
ZBED1O96006 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.64■□□□□ 0.89
ZBED1O96006 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.64■□□□□ 0.89
ZBED1O96006 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.64■□□□□ 0.89
ZBED1O96006 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
ZBED1O96006 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZBED1O96006 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.63■□□□□ 0.89
ZBED1O96006 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZBED1O96006 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.63■□□□□ 0.89
ZBED1O96006 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.63■□□□□ 0.89
ZBED1O96006 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.63■□□□□ 0.89
ZBED1O96006 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZBED1O96006 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZBED1O96006 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZBED1O96006 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.62■□□□□ 0.89
ZBED1O96006 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ZBED1O96006 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.62■□□□□ 0.89
ZBED1O96006 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.62■□□□□ 0.89
ZBED1O96006 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZBED1O96006 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms