Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.76■□□□□ 0.75
USP1O94782 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.76■□□□□ 0.75
USP1O94782 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.76■□□□□ 0.75
USP1O94782 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
USP1O94782 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP1O94782 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.75■□□□□ 0.75
USP1O94782 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 DUSP5P2-201ENST00000426873 1033 ntBASIC19.75■□□□□ 0.75
USP1O94782 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 NCF1B-203ENST00000435988 1254 ntBASIC19.75■□□□□ 0.75
USP1O94782 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.75■□□□□ 0.75
USP1O94782 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.75■□□□□ 0.75
USP1O94782 AC092118.2-201ENST00000613495 667 ntBASIC19.75■□□□□ 0.75
USP1O94782 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
USP1O94782 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.75■□□□□ 0.75
USP1O94782 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.75■□□□□ 0.75
USP1O94782 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP1O94782 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP1O94782 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
USP1O94782 TFP1-202ENST00000475455 1573 ntBASIC19.74■□□□□ 0.75
USP1O94782 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.74■□□□□ 0.75
USP1O94782 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 SLC29A4P1-201ENST00000398760 971 ntBASIC19.74■□□□□ 0.75
USP1O94782 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.74■□□□□ 0.75
USP1O94782 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
USP1O94782 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USP1O94782 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.74■□□□□ 0.75
USP1O94782 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP1O94782 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP1O94782 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP1O94782 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.73■□□□□ 0.75
USP1O94782 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.73■□□□□ 0.75
USP1O94782 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 AL032819.2-201ENST00000624543 2162 ntBASIC19.73■□□□□ 0.75
USP1O94782 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP1O94782 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.73■□□□□ 0.75
USP1O94782 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.73■□□□□ 0.75
USP1O94782 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.73■□□□□ 0.75
USP1O94782 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.73■□□□□ 0.75
USP1O94782 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.73■□□□□ 0.75
USP1O94782 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.73■□□□□ 0.75
USP1O94782 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 AC091874.3-201ENST00000512672 1195 ntBASIC19.73■□□□□ 0.75
USP1O94782 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms