Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCH4O75427 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
LRCH4O75427 AP003097.1-201ENST00000530657 1135 ntBASIC20.36■□□□□ 0.85
LRCH4O75427 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.36■□□□□ 0.85
LRCH4O75427 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCH4O75427 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LRCH4O75427 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.36■□□□□ 0.85
LRCH4O75427 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRCH4O75427 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.35■□□□□ 0.85
LRCH4O75427 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRCH4O75427 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
LRCH4O75427 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.35■□□□□ 0.85
LRCH4O75427 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LRCH4O75427 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.35■□□□□ 0.85
LRCH4O75427 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.35■□□□□ 0.85
LRCH4O75427 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH4O75427 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRCH4O75427 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.34■□□□□ 0.85
LRCH4O75427 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.34■□□□□ 0.85
LRCH4O75427 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.34■□□□□ 0.85
LRCH4O75427 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
LRCH4O75427 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.34■□□□□ 0.85
LRCH4O75427 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
LRCH4O75427 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.34■□□□□ 0.85
LRCH4O75427 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH4O75427 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.33■□□□□ 0.85
LRCH4O75427 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LRCH4O75427 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRCH4O75427 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.33■□□□□ 0.85
LRCH4O75427 AC026366.1-201ENST00000488803 879 ntBASIC20.33■□□□□ 0.85
LRCH4O75427 KRT18P16-201ENST00000510337 1294 ntBASIC20.33■□□□□ 0.85
LRCH4O75427 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH4O75427 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.33■□□□□ 0.85
LRCH4O75427 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.33■□□□□ 0.85
LRCH4O75427 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LRCH4O75427 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.33■□□□□ 0.84
LRCH4O75427 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH4O75427 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LRCH4O75427 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.32■□□□□ 0.84
LRCH4O75427 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRCH4O75427 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.32■□□□□ 0.84
LRCH4O75427 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.32■□□□□ 0.84
LRCH4O75427 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.32■□□□□ 0.84
LRCH4O75427 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.32■□□□□ 0.84
LRCH4O75427 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.32■□□□□ 0.84
LRCH4O75427 KRT8P8-201ENST00000434750 1448 ntBASIC20.32■□□□□ 0.84
LRCH4O75427 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.32■□□□□ 0.84
LRCH4O75427 ZNF815P-204ENST00000434898 1737 ntBASIC20.32■□□□□ 0.84
LRCH4O75427 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LRCH4O75427 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LRCH4O75427 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH4O75427 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms