Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN2BO60939 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SCN2BO60939 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN2BO60939 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SCN2BO60939 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN2BO60939 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN2BO60939 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCN2BO60939 AC004408.2-201ENST00000623613 2777 ntBASIC18.53■□□□□ 0.56
SCN2BO60939 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN2BO60939 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN2BO60939 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SCN2BO60939 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN2BO60939 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN2BO60939 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN2BO60939 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN2BO60939 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN2BO60939 MIR663A-201ENST00000385250 93 ntBASIC18.52■□□□□ 0.56
SCN2BO60939 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN2BO60939 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.52■□□□□ 0.56
SCN2BO60939 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN2BO60939 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN2BO60939 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN2BO60939 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN2BO60939 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN2BO60939 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN2BO60939 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SCN2BO60939 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCN2BO60939 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN2BO60939 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN2BO60939 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN2BO60939 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.51■□□□□ 0.55
SCN2BO60939 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.51■□□□□ 0.55
SCN2BO60939 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SCN2BO60939 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SCN2BO60939 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.51■□□□□ 0.55
SCN2BO60939 MIPEPP3-201ENST00000412105 444 ntBASIC18.51■□□□□ 0.55
SCN2BO60939 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 AC005829.2-201ENST00000571422 1056 ntBASIC18.51■□□□□ 0.55
SCN2BO60939 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SCN2BO60939 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SCN2BO60939 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN2BO60939 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.51■□□□□ 0.55
SCN2BO60939 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN2BO60939 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.5■□□□□ 0.55
SCN2BO60939 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.5■□□□□ 0.55
SCN2BO60939 AL137784.2-201ENST00000607332 1000 ntBASIC18.5■□□□□ 0.55
SCN2BO60939 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCN2BO60939 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN2BO60939 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN2BO60939 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN2BO60939 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms