Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PAX4O43316 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.96□□□□□ -0.18
PAX4O43316 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX4O43316 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PAX4O43316 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
PAX4O43316 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
PAX4O43316 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.95□□□□□ -0.18
PAX4O43316 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PAX4O43316 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.95□□□□□ -0.18
PAX4O43316 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.95□□□□□ -0.18
PAX4O43316 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.95□□□□□ -0.18
PAX4O43316 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.95□□□□□ -0.18
PAX4O43316 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 TCF3P1-201ENST00000423021 1937 ntBASIC13.95□□□□□ -0.18
PAX4O43316 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
PAX4O43316 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 AC007952.6-201ENST00000573168 2673 ntBASIC13.95□□□□□ -0.18
PAX4O43316 AC003957.1-201ENST00000625108 2673 ntBASIC13.95□□□□□ -0.18
PAX4O43316 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PAX4O43316 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.94□□□□□ -0.18
PAX4O43316 SOX15-203ENST00000570788 1093 ntBASIC13.94□□□□□ -0.18
PAX4O43316 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 AL691432.2-201ENST00000607222 2038 ntBASIC13.94□□□□□ -0.18
PAX4O43316 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PAX4O43316 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PAX4O43316 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PAX4O43316 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.94□□□□□ -0.18
PAX4O43316 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 PHGDH-210ENST00000641115 1638 ntBASIC13.93□□□□□ -0.18
PAX4O43316 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PAX4O43316 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.93□□□□□ -0.18
PAX4O43316 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PAX4O43316 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PAX4O43316 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.93□□□□□ -0.18
PAX4O43316 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PAX4O43316 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.93□□□□□ -0.18
PAX4O43316 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.93□□□□□ -0.18
PAX4O43316 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PAX4O43316 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.93□□□□□ -0.18
PAX4O43316 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms