Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.8■□□□□ 0.6
GSC2O15499 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.8■□□□□ 0.6
GSC2O15499 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.8■□□□□ 0.6
GSC2O15499 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GSC2O15499 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSC2O15499 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GSC2O15499 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.79■□□□□ 0.6
GSC2O15499 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.79■□□□□ 0.6
GSC2O15499 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GSC2O15499 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GSC2O15499 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.79■□□□□ 0.6
GSC2O15499 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.79■□□□□ 0.6
GSC2O15499 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.79■□□□□ 0.6
GSC2O15499 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSC2O15499 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GSC2O15499 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
GSC2O15499 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.78■□□□□ 0.6
GSC2O15499 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 TSPY26P-201ENST00000476365 1326 ntBASIC18.78■□□□□ 0.6
GSC2O15499 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.78■□□□□ 0.6
GSC2O15499 AL356441.2-201ENST00000443009 864 ntBASIC18.78■□□□□ 0.6
GSC2O15499 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 SLC7A5P2-201ENST00000553010 536 ntBASIC18.78■□□□□ 0.6
GSC2O15499 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GSC2O15499 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GSC2O15499 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSC2O15499 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.78■□□□□ 0.6
GSC2O15499 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.78■□□□□ 0.6
GSC2O15499 KRT87P-202ENST00000534226 1464 ntBASIC18.77■□□□□ 0.6
GSC2O15499 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.77■□□□□ 0.6
GSC2O15499 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.77■□□□□ 0.6
GSC2O15499 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GSC2O15499 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
GSC2O15499 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.77■□□□□ 0.6
GSC2O15499 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GSC2O15499 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GSC2O15499 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 AL356652.1-201ENST00000615962 565 ntBASIC18.77■□□□□ 0.6
GSC2O15499 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GSC2O15499 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GSC2O15499 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.77■□□□□ 0.6
GSC2O15499 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.77■□□□□ 0.59
GSC2O15499 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.77■□□□□ 0.59
GSC2O15499 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
GSC2O15499 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.77■□□□□ 0.59
GSC2O15499 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GSC2O15499 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms