Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP2A1O14983 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP2A1O14983 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
ATP2A1O14983 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP2A1O14983 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP2A1O14983 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.42■■□□□ 1.18
ATP2A1O14983 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP2A1O14983 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP2A1O14983 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP2A1O14983 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP2A1O14983 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP2A1O14983 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP2A1O14983 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.41■■□□□ 1.18
ATP2A1O14983 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.41■■□□□ 1.18
ATP2A1O14983 AL049597.2-201ENST00000565575 961 ntBASIC22.41■■□□□ 1.18
ATP2A1O14983 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.41■■□□□ 1.18
ATP2A1O14983 AL590326.2-201ENST00000625139 305 ntBASIC22.41■■□□□ 1.18
ATP2A1O14983 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP2A1O14983 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP2A1O14983 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
ATP2A1O14983 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP2A1O14983 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ATP2A1O14983 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ATP2A1O14983 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP2A1O14983 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 KRT18P57-201ENST00000443599 1254 ntBASIC22.4■■□□□ 1.18
ATP2A1O14983 KRT18P35-201ENST00000510488 1269 ntBASIC22.4■■□□□ 1.18
ATP2A1O14983 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP2A1O14983 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
ATP2A1O14983 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP2A1O14983 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP2A1O14983 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP2A1O14983 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP2A1O14983 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP2A1O14983 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.39■■□□□ 1.18
ATP2A1O14983 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP2A1O14983 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP2A1O14983 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP2A1O14983 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP2A1O14983 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP2A1O14983 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP2A1O14983 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP2A1O14983 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP2A1O14983 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
ATP2A1O14983 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.39■■□□□ 1.17
ATP2A1O14983 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
ATP2A1O14983 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.39■■□□□ 1.17
ATP2A1O14983 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP2A1O14983 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 FEM1AP1-201ENST00000431297 1995 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP2A1O14983 AC091390.4-202ENST00000476426 537 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP2A1O14983 AC128688.1-201ENST00000487626 519 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.38■■□□□ 1.17
ATP2A1O14983 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP2A1O14983 AC010203.1-204ENST00000548782 407 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 SLC25A1P4-201ENST00000567977 778 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 FAM87A-204ENST00000613235 858 ntBASIC22.38■■□□□ 1.17
ATP2A1O14983 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP2A1O14983 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 FAM207BP-201ENST00000447172 505 ntBASIC22.37■■□□□ 1.17
ATP2A1O14983 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP2A1O14983 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP2A1O14983 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP2A1O14983 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.37■■□□□ 1.17
ATP2A1O14983 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP2A1O14983 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP2A1O14983 AC073314.1-201ENST00000568729 2216 ntBASIC22.37■■□□□ 1.17
ATP2A1O14983 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms