Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH17O14917 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 AL023875.1-201ENST00000640777 796 ntBASIC18.66■□□□□ 0.58
PCDH17O14917 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH17O14917 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH17O14917 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH17O14917 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH17O14917 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH17O14917 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PCDH17O14917 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH17O14917 RARRES2P10-201ENST00000564312 460 ntBASIC18.65■□□□□ 0.58
PCDH17O14917 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH17O14917 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH17O14917 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDH17O14917 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDH17O14917 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH17O14917 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PCDH17O14917 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH17O14917 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH17O14917 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH17O14917 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH17O14917 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH17O14917 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 KRASP1-201ENST00000407852 552 ntBASIC18.64■□□□□ 0.57
PCDH17O14917 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH17O14917 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH17O14917 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH17O14917 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH17O14917 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDH17O14917 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH17O14917 KRT16P6-202ENST00000425692 1426 ntBASIC18.64■□□□□ 0.57
PCDH17O14917 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH17O14917 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH17O14917 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH17O14917 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH17O14917 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDH17O14917 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms