Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CLDN4O14493 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN4O14493 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN4O14493 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CLDN4O14493 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN4O14493 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN4O14493 KRT18P16-201ENST00000510337 1294 ntBASIC18.43■□□□□ 0.54
CLDN4O14493 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CLDN4O14493 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.43■□□□□ 0.54
CLDN4O14493 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN4O14493 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN4O14493 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN4O14493 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN4O14493 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN4O14493 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLDN4O14493 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN4O14493 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN4O14493 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN4O14493 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN4O14493 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN4O14493 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN4O14493 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN4O14493 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN4O14493 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLDN4O14493 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN4O14493 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN4O14493 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN4O14493 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN4O14493 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN4O14493 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.41■□□□□ 0.54
CLDN4O14493 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN4O14493 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN4O14493 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN4O14493 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN4O14493 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN4O14493 AL135905.2-201ENST00000584934 1404 ntBASIC18.4■□□□□ 0.54
CLDN4O14493 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN4O14493 SLC25A24-204ENST00000569674 2357 ntBASIC18.4■□□□□ 0.54
CLDN4O14493 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN4O14493 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms