Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLIC1O00299 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC1O00299 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC1O00299 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CLIC1O00299 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 AL162430.1-201ENST00000480705 870 ntBASIC18.42■□□□□ 0.54
CLIC1O00299 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLIC1O00299 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC1O00299 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC1O00299 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC1O00299 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC1O00299 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLIC1O00299 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLIC1O00299 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLIC1O00299 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC1O00299 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC1O00299 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.41■□□□□ 0.54
CLIC1O00299 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.41■□□□□ 0.54
CLIC1O00299 AC004911.1-201ENST00000416316 871 ntBASIC18.41■□□□□ 0.54
CLIC1O00299 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.41■□□□□ 0.54
CLIC1O00299 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLIC1O00299 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLIC1O00299 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLIC1O00299 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC1O00299 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC1O00299 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC1O00299 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC1O00299 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC1O00299 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC1O00299 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 AC133552.2-202ENST00000575694 574 ntBASIC18.4■□□□□ 0.54
CLIC1O00299 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLIC1O00299 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLIC1O00299 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC1O00299 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.39■□□□□ 0.54
CLIC1O00299 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.39■□□□□ 0.54
CLIC1O00299 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIC1O00299 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CLIC1O00299 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC1O00299 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLIC1O00299 AC022517.1-201ENST00000592429 346 ntBASIC18.39■□□□□ 0.53
CLIC1O00299 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLIC1O00299 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC1O00299 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms