Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM1O00151 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM1O00151 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM1O00151 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM1O00151 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM1O00151 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM1O00151 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM1O00151 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM1O00151 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM1O00151 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM1O00151 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM1O00151 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM1O00151 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM1O00151 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDLIM1O00151 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDLIM1O00151 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM1O00151 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM1O00151 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM1O00151 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM1O00151 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.55■□□□□ 0.56
PDLIM1O00151 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 AC016769.1-201ENST00000409132 1010 ntBASIC18.55■□□□□ 0.56
PDLIM1O00151 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM1O00151 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM1O00151 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM1O00151 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM1O00151 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM1O00151 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM1O00151 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 AL390961.4-201ENST00000623958 2535 ntBASIC18.55■□□□□ 0.56
PDLIM1O00151 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.55■□□□□ 0.56
PDLIM1O00151 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM1O00151 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PDLIM1O00151 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 AC104581.1-202ENST00000635932 2618 ntBASIC18.54■□□□□ 0.56
PDLIM1O00151 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM1O00151 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 SLC7A5P1-201ENST00000568957 537 ntBASIC18.54■□□□□ 0.56
PDLIM1O00151 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.54■□□□□ 0.56
PDLIM1O00151 UBE2DNL-204ENST00000602536 740 ntBASIC18.54■□□□□ 0.56
PDLIM1O00151 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM1O00151 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM1O00151 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM1O00151 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.53■□□□□ 0.56
PDLIM1O00151 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms