Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
CCDC188H7C350 CYP2T3P-201ENST00000601990 817 ntBASIC20.32■□□□□ 0.84
CCDC188H7C350 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC188H7C350 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC188H7C350 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC188H7C350 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC188H7C350 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 TEX21P-204ENST00000641479 1693 ntBASIC20.32■□□□□ 0.84
CCDC188H7C350 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC188H7C350 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC188H7C350 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC188H7C350 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC188H7C350 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 AL049812.1-201ENST00000432563 2267 ntBASIC20.31■□□□□ 0.84
CCDC188H7C350 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC188H7C350 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.31■□□□□ 0.84
CCDC188H7C350 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC188H7C350 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC188H7C350 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC188H7C350 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC188H7C350 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC188H7C350 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC188H7C350 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC188H7C350 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC188H7C350 AC005082.1-201ENST00000413042 2259 ntBASIC20.3■□□□□ 0.84
CCDC188H7C350 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC188H7C350 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 AC018553.1-201ENST00000616682 1458 ntBASIC20.3■□□□□ 0.84
CCDC188H7C350 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC188H7C350 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC188H7C350 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC188H7C350 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC188H7C350 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC188H7C350 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC188H7C350 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC188H7C350 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC188H7C350 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC188H7C350 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC188H7C350 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC188H7C350 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC188H7C350 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC188H7C350 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC188H7C350 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC188H7C350 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 AC068338.2-201ENST00000563278 1430 ntBASIC20.28■□□□□ 0.84
CCDC188H7C350 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC188H7C350 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC188H7C350 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC188H7C350 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms