Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 AC009299.2-201ENST00000482477 511 ntBASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 AC138907.5-202ENST00000569484 235 ntBASIC13.9□□□□□ -0.18
LINC01549A6NIU2 AL512631.2-201ENST00000604634 923 ntBASIC13.9□□□□□ -0.18
LINC01549A6NIU2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
LINC01549A6NIU2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.9□□□□□ -0.19
LINC01549A6NIU2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 AC090164.3-201ENST00000610780 2143 ntBASIC13.89□□□□□ -0.19
LINC01549A6NIU2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.89□□□□□ -0.19
LINC01549A6NIU2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01549A6NIU2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 AC243732.1-201ENST00000612648 864 ntBASIC13.88□□□□□ -0.19
LINC01549A6NIU2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 MKRN4P-201ENST00000444706 1521 ntBASIC13.88□□□□□ -0.19
LINC01549A6NIU2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 Z98044.1-201ENST00000632503 1764 ntBASIC13.88□□□□□ -0.19
LINC01549A6NIU2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms