Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SMUG1P1-201ENST00000590640 811 ntBASIC16.93■□□□□ 0.3
HMX3A6NHT5 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMX3A6NHT5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMX3A6NHT5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMX3A6NHT5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMX3A6NHT5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 BX119927.1-201ENST00000636596 1552 ntBASIC16.91■□□□□ 0.3
HMX3A6NHT5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 AP001330.3-201ENST00000520123 633 ntBASIC16.91■□□□□ 0.3
HMX3A6NHT5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 AC027682.1-201ENST00000562846 899 ntBASIC16.91■□□□□ 0.3
HMX3A6NHT5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 TSPY26P-201ENST00000476365 1326 ntBASIC16.91■□□□□ 0.3
HMX3A6NHT5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.91■□□□□ 0.3
HMX3A6NHT5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMX3A6NHT5 AC124067.4-201ENST00000519691 2379 ntBASIC16.91■□□□□ 0.3
HMX3A6NHT5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 EDA-201ENST00000338901 1233 ntBASIC16.9■□□□□ 0.3
HMX3A6NHT5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.9■□□□□ 0.3
HMX3A6NHT5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMX3A6NHT5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms