Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM235A6NFC5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 AC104581.1-202ENST00000635932 2618 ntBASIC16.67■□□□□ 0.26
TMEM235A6NFC5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 AL161938.1-201ENST00000569833 2180 ntBASIC16.67■□□□□ 0.26
TMEM235A6NFC5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 KRT19P1-201ENST00000405746 1186 ntBASIC16.67■□□□□ 0.26
TMEM235A6NFC5 YBX1P1-201ENST00000445822 960 ntBASIC16.67■□□□□ 0.26
TMEM235A6NFC5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM235A6NFC5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 AL049812.1-201ENST00000432563 2267 ntBASIC16.66■□□□□ 0.26
TMEM235A6NFC5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM235A6NFC5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 LETM1P2-201ENST00000597330 2178 ntBASIC16.65■□□□□ 0.26
TMEM235A6NFC5 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.65■□□□□ 0.26
TMEM235A6NFC5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms