Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 DGCR10-201ENST00000609839 495 ntBASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 KRT8P8-201ENST00000434750 1448 ntBASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3FA6NER0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AL512408.1-201ENST00000569378 2000 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AC005521.1-201ENST00000393351 872 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AC130371.2-201ENST00000619443 611 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AC092865.7-201ENST00000641832 219 ntBASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TBC1D3FA6NER0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 AC011298.2-201ENST00000617989 482 ntBASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TBC1D3FA6NER0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 RCC2P6-201ENST00000526625 1557 ntBASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AP005212.1-201ENST00000581547 1997 ntBASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AC004951.3-201ENST00000418645 1148 ntBASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AL137013.1-201ENST00000432946 1228 ntBASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 AL391422.3-201ENST00000603791 2761 ntBASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3FA6NER0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms