Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 LSM12P1-201ENST00000411836 588 ntBASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 RARRES2P6-201ENST00000567333 442 ntBASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV9S1A1TA0A576 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CROCCP3-202ENST00000420820 1947 ntBASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 AL049812.1-201ENST00000432563 2267 ntBASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 TFP1-202ENST00000475455 1573 ntBASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 AC004911.1-201ENST00000416316 871 ntBASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV9S1A1TA0A576 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 NEFHP1-201ENST00000412845 2629 ntBASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 TEX21P-204ENST00000641479 1693 ntBASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 AL162430.1-201ENST00000480705 870 ntBASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 AC133552.2-202ENST00000575694 574 ntBASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 AL138781.2-201ENST00000617896 1843 ntBASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV9S1A1TA0A576 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 AC141586.3-201ENST00000562166 1838 ntBASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV9S1A1TA0A576 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV9S1A1TA0A576 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV9S1A1TA0A576 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV9S1A1TA0A576 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV9S1A1TA0A576 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms