Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 C1QL1P1-201ENST00000568105 661 ntBASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV25A0A0B4J276 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TRAV25A0A0B4J276 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
TRAV25A0A0B4J276 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV25A0A0B4J276 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 HTR7P1-201ENST00000538670 1336 ntBASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 AP002982.1-201ENST00000492365 877 ntBASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV25A0A0B4J276 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 AC008550.1-201ENST00000511500 884 ntBASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV25A0A0B4J276 AL391422.3-201ENST00000603791 2761 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms