Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 AC100791.3-201ENST00000617619 330 ntBASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 AC005332.8-201ENST00000622750 2735 ntBASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 AC087633.2-202ENST00000565166 1439 ntBASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 AC026271.2-201ENST00000428091 497 ntBASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-4A0A0B4J246 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 AC231657.2-201ENST00000624556 255 ntBASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms