Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 AL356740.2-201ENST00000601559 647 ntBASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 AC141586.3-201ENST00000562166 1838 ntBASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 AC239859.2-201ENST00000444165 318 ntBASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 PRORSD1P-202ENST00000563365 2154 ntBASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV12-1A0A0B4J245 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV12-1A0A0B4J245 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV12-1A0A0B4J245 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV12-1A0A0B4J245 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TRAV12-1A0A0B4J245 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV12-1A0A0B4J245 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms