Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
RFT1Q96AA3 AP000542.2-201ENST00000623199 6179 ntBASIC4.78□□□□□ -1.64
RFT1Q96AA3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SUGT1P2-201ENST00000379452 992 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL009179.1-201ENST00000406085 265 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC104333.2-201ENST00000422630 192 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 NANOGP4-201ENST00000427230 913 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 RPL34P6-201ENST00000432390 345 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC006335.2-201ENST00000437993 330 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 SCAND3P1-201ENST00000439854 1060 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 HLA-DPA3-207ENST00000454398 229 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL133244.1-201ENST00000456007 258 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 RPS23P6-201ENST00000466136 431 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 LSM3P4-201ENST00000502948 309 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 MIR3908-201ENST00000579798 126 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 H3F3BP2-201ENST00000583907 357 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AC063977.5-201ENST00000601044 974 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 IFIT1P1-201ENST00000400497 1449 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.77□□□□□ -1.65
RFT1Q96AA3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFT1Q96AA3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.77□□□□□ -1.65
RFT1Q96AA3 AL450345.1-202ENST00000605741 3881 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 RNU1-150P-201ENST00000362491 162 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 BX119321.1-201ENST00000428912 797 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 MTND4LP7-201ENST00000431728 294 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC090018.1-201ENST00000434369 367 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 CLNS1AP1-201ENST00000435954 682 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AL035551.1-201ENST00000446931 348 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 PSMC1P13-201ENST00000458195 985 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC092691.2-201ENST00000461787 803 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 RN7SL583P-201ENST00000475692 287 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 NENFP3-201ENST00000503735 313 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC006499.4-201ENST00000510947 694 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 HMGB1P46-201ENST00000520062 610 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC026826.3-201ENST00000561747 158 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AP001962.1-201ENST00000624114 559 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 AC087565.3-203ENST00000641018 837 ntBASIC4.76□□□□□ -1.65
RFT1Q96AA3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFT1Q96AA3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.76□□□□□ -1.65
RFT1Q96AA3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms