RNA–Protein interactions for RNA: ENST00000427230.2

NANOGP4-201, Transcript of Nanog homeobox pseudogene 4, humanhuman

BASIC

Gene NANOGP4, Length 913 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP4-201ENST00000427230 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
NANOGP4-201ENST00000427230 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
NANOGP4-201ENST00000427230 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
NANOGP4-201ENST00000427230 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
NANOGP4-201ENST00000427230 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
NANOGP4-201ENST00000427230 FOXD1Q16676 465 aa15.89■□□□□ 0.13
NANOGP4-201ENST00000427230 ADRA2BP18089 450 aa15.27■□□□□ 0.04
NANOGP4-201ENST00000427230 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
NANOGP4-201ENST00000427230 POTEDQ86YR6 584 aa15.08■□□□□ 0
NANOGP4-201ENST00000427230 MSH5O43196 834 aa14.87□□□□□ -0.03
NANOGP4-201ENST00000427230 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NANOGP4-201ENST00000427230 KCNA4P22459 653 aa14.4□□□□□ -0.1
NANOGP4-201ENST00000427230 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
NANOGP4-201ENST00000427230 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
NANOGP4-201ENST00000427230 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
NANOGP4-201ENST00000427230 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
NANOGP4-201ENST00000427230 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
NANOGP4-201ENST00000427230 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
NANOGP4-201ENST00000427230 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
NANOGP4-201ENST00000427230 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
NANOGP4-201ENST00000427230 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
NANOGP4-201ENST00000427230 ABCC9O60706 1549 aa13.49□□□□□ -0.25
NANOGP4-201ENST00000427230 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
NANOGP4-201ENST00000427230 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
NANOGP4-201ENST00000427230 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
NANOGP4-201ENST00000427230 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
NANOGP4-201ENST00000427230 ZBTB22O15209 634 aa13.24□□□□□ -0.29
NANOGP4-201ENST00000427230 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
NANOGP4-201ENST00000427230 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
NANOGP4-201ENST00000427230 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
NANOGP4-201ENST00000427230 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
NANOGP4-201ENST00000427230 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
NANOGP4-201ENST00000427230 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
NANOGP4-201ENST00000427230 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
NANOGP4-201ENST00000427230 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
NANOGP4-201ENST00000427230 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
NANOGP4-201ENST00000427230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.376e-10■□□□□ 10.3
NANOGP4-201ENST00000427230 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
NANOGP4-201ENST00000427230 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
NANOGP4-201ENST00000427230 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
NANOGP4-201ENST00000427230 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
NANOGP4-201ENST00000427230 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
NANOGP4-201ENST00000427230 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
NANOGP4-201ENST00000427230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
NANOGP4-201ENST00000427230 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
NANOGP4-201ENST00000427230 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
NANOGP4-201ENST00000427230 NACADO15069 1562 aa12.25□□□□□ -0.45
NANOGP4-201ENST00000427230 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
NANOGP4-201ENST00000427230 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
NANOGP4-201ENST00000427230 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
NANOGP4-201ENST00000427230 FKBP8Q14318 412 aa12.19□□□□□ -0.46
NANOGP4-201ENST00000427230 APLP2Q06481 763 aa12.16□□□□□ -0.46
NANOGP4-201ENST00000427230 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
NANOGP4-201ENST00000427230 CC2D2AQ9P2K1 1620 aa12.13□□□□□ -0.47
NANOGP4-201ENST00000427230 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
NANOGP4-201ENST00000427230 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
NANOGP4-201ENST00000427230 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
NANOGP4-201ENST00000427230 CAPN15O75808 1086 aa12.04□□□□□ -0.48
NANOGP4-201ENST00000427230 POLA2Q14181 598 aa11.95□□□□□ -0.5
NANOGP4-201ENST00000427230 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
NANOGP4-201ENST00000427230 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
NANOGP4-201ENST00000427230 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
NANOGP4-201ENST00000427230 ABCB7O75027 752 aa11.87□□□□□ -0.51
NANOGP4-201ENST00000427230 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
NANOGP4-201ENST00000427230 CUX2O14529 1486 aa11.87□□□□□ -0.51
NANOGP4-201ENST00000427230 DSG3P32926 999 aa11.85□□□□□ -0.51
NANOGP4-201ENST00000427230 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
NANOGP4-201ENST00000427230 FBLN2P98095 1184 aa11.83□□□□□ -0.52
NANOGP4-201ENST00000427230 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
NANOGP4-201ENST00000427230 POTEHQ6S545 545 aa11.73□□□□□ -0.53
NANOGP4-201ENST00000427230 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
NANOGP4-201ENST00000427230 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
NANOGP4-201ENST00000427230 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
NANOGP4-201ENST00000427230 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
NANOGP4-201ENST00000427230 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
NANOGP4-201ENST00000427230 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
NANOGP4-201ENST00000427230 PROM2Q8N271 834 aa11.53□□□□□ -0.56
NANOGP4-201ENST00000427230 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
NANOGP4-201ENST00000427230 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
NANOGP4-201ENST00000427230 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
NANOGP4-201ENST00000427230 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
NANOGP4-201ENST00000427230 NESP48681 1621 aa11.41□□□□□ -0.58
NANOGP4-201ENST00000427230 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
NANOGP4-201ENST00000427230 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
NANOGP4-201ENST00000427230 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
NANOGP4-201ENST00000427230 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
NANOGP4-201ENST00000427230 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
NANOGP4-201ENST00000427230 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
NANOGP4-201ENST00000427230 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
NANOGP4-201ENST00000427230 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
NANOGP4-201ENST00000427230 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
NANOGP4-201ENST00000427230 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
NANOGP4-201ENST00000427230 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
NANOGP4-201ENST00000427230 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
NANOGP4-201ENST00000427230 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
NANOGP4-201ENST00000427230 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
NANOGP4-201ENST00000427230 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
NANOGP4-201ENST00000427230 MIER1Q8N108 512 aa11.19□□□□□ -0.62
NANOGP4-201ENST00000427230 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
NANOGP4-201ENST00000427230 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms