Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 AL356585.10-201ENST00000641883 123 ntBASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.53□□□□□ -1.04
HPS5Q9UPZ3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
HPS5Q9UPZ3 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
HPS5Q9UPZ3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.52□□□□□ -1.04
HPS5Q9UPZ3 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.52□□□□□ -1.04
HPS5Q9UPZ3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 ZNF840P-201ENST00000504759 1996 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RNA5SP232-201ENST00000364144 119 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RNU6-1103P-201ENST00000384150 107 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 Y_RNA.579-201ENST00000390939 94 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 MIR1275-201ENST00000408770 80 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RN7SKP32-201ENST00000410167 303 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 Y_RNA.598-201ENST00000410480 95 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 GEMIN2P2-201ENST00000418195 715 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 Z82205.1-201ENST00000428456 297 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 GAPDHP19-201ENST00000431768 1005 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RPL3P11-201ENST00000434028 1146 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 HMGB1P16-201ENST00000447155 540 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AL672138.1-201ENST00000450604 1015 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RPSAP48-201ENST00000466509 889 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RN7SL88P-201ENST00000480166 299 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC066616.1-201ENST00000486795 413 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC103851.1-201ENST00000506833 274 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC011411.1-201ENST00000509592 876 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 Y_RNA.720-201ENST00000517166 92 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 IGLVI-42-201ENST00000522485 381 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 BRD9P1-201ENST00000529855 560 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AL162413.1-201ENST00000603198 110 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC245014.2-201ENST00000603689 287 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 NUTF2P8-201ENST00000604593 363 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 TAS2R6P-201ENST00000605022 826 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC246785.4-201ENST00000605374 287 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 uc_338.5-201ENST00000611839 155 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AP000766.1-201ENST00000561746 4140 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC068733.2-201ENST00000605434 1418 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 NCOA4P2-201ENST00000340589 1813 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 DCAF13P3-201ENST00000561147 1334 ntBASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HPS5Q9UPZ3 AC008937.3-201ENST00000606813 1700 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 MIR369-201ENST00000362155 70 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 RNY3P3-201ENST00000363816 102 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 MIR99A-201ENST00000384906 81 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 AL133260.1-201ENST00000405720 405 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 RN7SKP268-201ENST00000411107 316 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 RPSAP60-201ENST00000415403 880 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 PTP4A1P1-201ENST00000420539 515 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 AL353678.1-201ENST00000422735 741 ntBASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.51□□□□□ -1.05
HPS5Q9UPZ3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 410.6 ms