Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 OR7K1P-201ENST00000546439 926 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL512624.1-201ENST00000613638 469 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC130448.2-201ENST00000624082 374 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 FAM157B-203ENST00000639350 358 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC109315.1-201ENST00000584143 1347 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 CASC19-280ENST00000642102 1351 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL391262.1-201ENST00000556558 1992 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC103591.2-201ENST00000265259 766 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 MIR323A-201ENST00000362199 86 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL356057.2-201ENST00000403318 432 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL590002.1-201ENST00000406554 418 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 FCF1P10-201ENST00000407590 479 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 RPL21P50-201ENST00000417698 477 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 MTND4LP10-201ENST00000435146 291 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL512286.1-201ENST00000439244 400 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 DPPA3P1-201ENST00000448050 469 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 PRDX1P1-201ENST00000449329 596 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC117395.1-201ENST00000487390 403 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC008638.1-201ENST00000506035 866 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 MTND3P22-201ENST00000510932 243 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 CYP4F27P-201ENST00000514557 494 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 RFPL4AP3-201ENST00000515267 345 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC120036.3-201ENST00000517826 292 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC008126.1-201ENST00000549019 480 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL049870.4-201ENST00000555741 486 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC008507.3-201ENST00000585753 472 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC013244.1-201ENST00000604279 193 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AL365503.1-201ENST00000605247 905 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC055764.2-201ENST00000610089 670 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC023158.2-201ENST00000614876 543 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC025162.2-201ENST00000619602 560 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 AC020658.2-201ENST00000559030 4020 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ZC3H4Q9UPT8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 NCOA4P3-201ENST00000513203 1877 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 AC123769.1-201ENST00000530992 3192 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 MTCO1P23-201ENST00000415223 1526 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 LYARP1-201ENST00000436977 1501 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 RPS3AP23-201ENST00000401762 784 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 RNA5SP178-201ENST00000410380 128 ntBASIC8.19□□□□□ -1.1
ZC3H4Q9UPT8 RPL5P6-201ENST00000425640 886 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms