RNA–Protein interactions for RNA: ENST00000610089.1

AC055764.2-201, humanhuman

BASIC

Gene AC055764.2, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055764.2-201ENST00000610089 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
AC055764.2-201ENST00000610089 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
AC055764.2-201ENST00000610089 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
AC055764.2-201ENST00000610089 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
AC055764.2-201ENST00000610089 FOXD1Q16676 465 aa19.55■□□□□ 0.72
AC055764.2-201ENST00000610089 MSH5O43196 834 aa18.53■□□□□ 0.56
AC055764.2-201ENST00000610089 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
AC055764.2-201ENST00000610089 POTEDQ86YR6 584 aa18.43■□□□□ 0.54
AC055764.2-201ENST00000610089 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
AC055764.2-201ENST00000610089 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
AC055764.2-201ENST00000610089 ADRA2BP18089 450 aa18.04■□□□□ 0.48
AC055764.2-201ENST00000610089 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
AC055764.2-201ENST00000610089 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
AC055764.2-201ENST00000610089 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
AC055764.2-201ENST00000610089 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
AC055764.2-201ENST00000610089 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
AC055764.2-201ENST00000610089 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
AC055764.2-201ENST00000610089 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
AC055764.2-201ENST00000610089 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
AC055764.2-201ENST00000610089 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
AC055764.2-201ENST00000610089 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
AC055764.2-201ENST00000610089 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
AC055764.2-201ENST00000610089 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
AC055764.2-201ENST00000610089 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
AC055764.2-201ENST00000610089 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
AC055764.2-201ENST00000610089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
AC055764.2-201ENST00000610089 KCNA4P22459 653 aa15.06■□□□□ 0
AC055764.2-201ENST00000610089 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
AC055764.2-201ENST00000610089 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
AC055764.2-201ENST00000610089 CAPN15O75808 1086 aa14.65□□□□□ -0.06
AC055764.2-201ENST00000610089 DSG3P32926 999 aa14.62□□□□□ -0.07
AC055764.2-201ENST00000610089 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
AC055764.2-201ENST00000610089 APLP2Q06481 763 aa14.51□□□□□ -0.09
AC055764.2-201ENST00000610089 POTEHQ6S545 545 aa14.42□□□□□ -0.1
AC055764.2-201ENST00000610089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
AC055764.2-201ENST00000610089 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
AC055764.2-201ENST00000610089 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
AC055764.2-201ENST00000610089 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
AC055764.2-201ENST00000610089 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
AC055764.2-201ENST00000610089 ABCB7O75027 752 aa14.24□□□□□ -0.13
AC055764.2-201ENST00000610089 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
AC055764.2-201ENST00000610089 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
AC055764.2-201ENST00000610089 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
AC055764.2-201ENST00000610089 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
AC055764.2-201ENST00000610089 POLA2Q14181 598 aa13.93□□□□□ -0.18
AC055764.2-201ENST00000610089 ZBTB22O15209 634 aa13.9□□□□□ -0.18
AC055764.2-201ENST00000610089 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
AC055764.2-201ENST00000610089 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
AC055764.2-201ENST00000610089 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
AC055764.2-201ENST00000610089 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
AC055764.2-201ENST00000610089 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
AC055764.2-201ENST00000610089 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
AC055764.2-201ENST00000610089 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
AC055764.2-201ENST00000610089 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
AC055764.2-201ENST00000610089 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
AC055764.2-201ENST00000610089 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
AC055764.2-201ENST00000610089 FBLN2P98095 1184 aa13.28□□□□□ -0.28
AC055764.2-201ENST00000610089 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
AC055764.2-201ENST00000610089 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC055764.2-201ENST00000610089 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
AC055764.2-201ENST00000610089 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
AC055764.2-201ENST00000610089 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
AC055764.2-201ENST00000610089 HAX1O00165 279 aa13.21□□□□□ -0.29
AC055764.2-201ENST00000610089 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
AC055764.2-201ENST00000610089 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
AC055764.2-201ENST00000610089 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
AC055764.2-201ENST00000610089 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
AC055764.2-201ENST00000610089 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
AC055764.2-201ENST00000610089 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
AC055764.2-201ENST00000610089 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
AC055764.2-201ENST00000610089 EVX2Q03828 476 aa12.91□□□□□ -0.34
AC055764.2-201ENST00000610089 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC055764.2-201ENST00000610089 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
AC055764.2-201ENST00000610089 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
AC055764.2-201ENST00000610089 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
AC055764.2-201ENST00000610089 GABBR2O75899 941 aa12.7□□□□□ -0.38
AC055764.2-201ENST00000610089 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
AC055764.2-201ENST00000610089 CLCN6P51797 869 aa12.58□□□□□ -0.4
AC055764.2-201ENST00000610089 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
AC055764.2-201ENST00000610089 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
AC055764.2-201ENST00000610089 LHX8Q68G74 356 aa12.55□□□□□ -0.4
AC055764.2-201ENST00000610089 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
AC055764.2-201ENST00000610089 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
AC055764.2-201ENST00000610089 PROM2Q8N271 834 aa12.39□□□□□ -0.43
AC055764.2-201ENST00000610089 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
AC055764.2-201ENST00000610089 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
AC055764.2-201ENST00000610089 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
AC055764.2-201ENST00000610089 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
AC055764.2-201ENST00000610089 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
AC055764.2-201ENST00000610089 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
AC055764.2-201ENST00000610089 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
AC055764.2-201ENST00000610089 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
AC055764.2-201ENST00000610089 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
AC055764.2-201ENST00000610089 OTUD5Q96G74 571 aa12□□□□□ -0.49
AC055764.2-201ENST00000610089 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
AC055764.2-201ENST00000610089 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
AC055764.2-201ENST00000610089 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
AC055764.2-201ENST00000610089 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
AC055764.2-201ENST00000610089 MIER1Q8N108 512 aa11.95□□□□□ -0.5
AC055764.2-201ENST00000610089 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms