RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
CDKN3-205ENST00000458126 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
CDKN3-205ENST00000458126 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
CDKN3-205ENST00000458126 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
CDKN3-205ENST00000458126 FOXD1Q16676 465 aa18.36■□□□□ 0.53
CDKN3-205ENST00000458126 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
CDKN3-205ENST00000458126 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
CDKN3-205ENST00000458126 ADRA2BP18089 450 aa17.25■□□□□ 0.35
CDKN3-205ENST00000458126 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
CDKN3-205ENST00000458126 MSH5O43196 834 aa17.18■□□□□ 0.34
CDKN3-205ENST00000458126 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
CDKN3-205ENST00000458126 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
CDKN3-205ENST00000458126 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
CDKN3-205ENST00000458126 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
CDKN3-205ENST00000458126 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
CDKN3-205ENST00000458126 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
CDKN3-205ENST00000458126 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
CDKN3-205ENST00000458126 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
CDKN3-205ENST00000458126 HOXD11P31277 338 aaPredicted RBP15.22■□□□□ 0.03
CDKN3-205ENST00000458126 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
CDKN3-205ENST00000458126 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
CDKN3-205ENST00000458126 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
CDKN3-205ENST00000458126 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
CDKN3-205ENST00000458126 KCNA4P22459 653 aa14.74□□□□□ -0.05
CDKN3-205ENST00000458126 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
CDKN3-205ENST00000458126 ABCC9O60706 1549 aa14.58□□□□□ -0.08
CDKN3-205ENST00000458126 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
CDKN3-205ENST00000458126 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
CDKN3-205ENST00000458126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDKN3-205ENST00000458126 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
CDKN3-205ENST00000458126 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
CDKN3-205ENST00000458126 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
CDKN3-205ENST00000458126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CDKN3-205ENST00000458126 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CDKN3-205ENST00000458126 APLP2Q06481 763 aa13.9□□□□□ -0.18
CDKN3-205ENST00000458126 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
CDKN3-205ENST00000458126 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
CDKN3-205ENST00000458126 CAPN15O75808 1086 aa13.86□□□□□ -0.19
CDKN3-205ENST00000458126 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
CDKN3-205ENST00000458126 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
CDKN3-205ENST00000458126 DSG3P32926 999 aa13.77□□□□□ -0.21
CDKN3-205ENST00000458126 NISCHQ9Y2I1 1504 aa13.75□□□□□ -0.21
CDKN3-205ENST00000458126 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
CDKN3-205ENST00000458126 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
CDKN3-205ENST00000458126 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
CDKN3-205ENST00000458126 ZBTB22O15209 634 aa13.54□□□□□ -0.24
CDKN3-205ENST00000458126 ABCB7O75027 752 aa13.52□□□□□ -0.25
CDKN3-205ENST00000458126 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
CDKN3-205ENST00000458126 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
CDKN3-205ENST00000458126 CUX2O14529 1486 aa13.38□□□□□ -0.27
CDKN3-205ENST00000458126 POLA2Q14181 598 aa13.38□□□□□ -0.27
CDKN3-205ENST00000458126 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
CDKN3-205ENST00000458126 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
CDKN3-205ENST00000458126 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDKN3-205ENST00000458126 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
CDKN3-205ENST00000458126 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CDKN3-205ENST00000458126 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
CDKN3-205ENST00000458126 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
CDKN3-205ENST00000458126 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
CDKN3-205ENST00000458126 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
CDKN3-205ENST00000458126 FBLN2P98095 1184 aa12.93□□□□□ -0.34
CDKN3-205ENST00000458126 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
CDKN3-205ENST00000458126 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
CDKN3-205ENST00000458126 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
CDKN3-205ENST00000458126 POTEHQ6S545 545 aa12.88□□□□□ -0.35
CDKN3-205ENST00000458126 BICRAQ9NZM4 1560 aa12.84□□□□□ -0.35
CDKN3-205ENST00000458126 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
CDKN3-205ENST00000458126 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
CDKN3-205ENST00000458126 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
CDKN3-205ENST00000458126 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
CDKN3-205ENST00000458126 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
CDKN3-205ENST00000458126 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
CDKN3-205ENST00000458126 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
CDKN3-205ENST00000458126 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
CDKN3-205ENST00000458126 SOCS7O14512 581 aa12.7□□□□□ -0.38
CDKN3-205ENST00000458126 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CDKN3-205ENST00000458126 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
CDKN3-205ENST00000458126 NACADO15069 1562 aa12.63□□□□□ -0.39
CDKN3-205ENST00000458126 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
CDKN3-205ENST00000458126 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
CDKN3-205ENST00000458126 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
CDKN3-205ENST00000458126 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
CDKN3-205ENST00000458126 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
CDKN3-205ENST00000458126 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
CDKN3-205ENST00000458126 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDKN3-205ENST00000458126 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
CDKN3-205ENST00000458126 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
CDKN3-205ENST00000458126 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
CDKN3-205ENST00000458126 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
CDKN3-205ENST00000458126 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
CDKN3-205ENST00000458126 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
CDKN3-205ENST00000458126 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
CDKN3-205ENST00000458126 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
CDKN3-205ENST00000458126 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
CDKN3-205ENST00000458126 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
CDKN3-205ENST00000458126 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
CDKN3-205ENST00000458126 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
CDKN3-205ENST00000458126 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
CDKN3-205ENST00000458126 HAX1O00165 279 aa12.21□□□□□ -0.45
CDKN3-205ENST00000458126 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms