RNA–Protein interactions for RNA: ENST00000555741.1

AL049870.4-201, humanhuman

BASIC

Gene AL049870.4, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049870.4-201ENST00000555741 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
AL049870.4-201ENST00000555741 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
AL049870.4-201ENST00000555741 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
AL049870.4-201ENST00000555741 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
AL049870.4-201ENST00000555741 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
AL049870.4-201ENST00000555741 ADRA2BP18089 450 aa14.3□□□□□ -0.12
AL049870.4-201ENST00000555741 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
AL049870.4-201ENST00000555741 KCNA4P22459 653 aa14.08□□□□□ -0.16
AL049870.4-201ENST00000555741 FOXD1Q16676 465 aa14.08□□□□□ -0.16
AL049870.4-201ENST00000555741 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
AL049870.4-201ENST00000555741 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
AL049870.4-201ENST00000555741 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
AL049870.4-201ENST00000555741 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
AL049870.4-201ENST00000555741 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
AL049870.4-201ENST00000555741 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
AL049870.4-201ENST00000555741 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
AL049870.4-201ENST00000555741 MSH5O43196 834 aa13.08□□□□□ -0.32
AL049870.4-201ENST00000555741 ZBTB22O15209 634 aa13.04□□□□□ -0.32
AL049870.4-201ENST00000555741 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
AL049870.4-201ENST00000555741 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
AL049870.4-201ENST00000555741 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
AL049870.4-201ENST00000555741 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
AL049870.4-201ENST00000555741 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
AL049870.4-201ENST00000555741 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
AL049870.4-201ENST00000555741 RNF216Q9NWF9 866 aaPredicted RBP12.46□□□□□ -0.41
AL049870.4-201ENST00000555741 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
AL049870.4-201ENST00000555741 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
AL049870.4-201ENST00000555741 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
AL049870.4-201ENST00000555741 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
AL049870.4-201ENST00000555741 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
AL049870.4-201ENST00000555741 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
AL049870.4-201ENST00000555741 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
AL049870.4-201ENST00000555741 FKBP8Q14318 412 aa12.12□□□□□ -0.47
AL049870.4-201ENST00000555741 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
AL049870.4-201ENST00000555741 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
AL049870.4-201ENST00000555741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
AL049870.4-201ENST00000555741 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
AL049870.4-201ENST00000555741 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
AL049870.4-201ENST00000555741 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
AL049870.4-201ENST00000555741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
AL049870.4-201ENST00000555741 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
AL049870.4-201ENST00000555741 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
AL049870.4-201ENST00000555741 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
AL049870.4-201ENST00000555741 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
AL049870.4-201ENST00000555741 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
AL049870.4-201ENST00000555741 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
AL049870.4-201ENST00000555741 PROM2Q8N271 834 aa11.36□□□□□ -0.59
AL049870.4-201ENST00000555741 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
AL049870.4-201ENST00000555741 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
AL049870.4-201ENST00000555741 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
AL049870.4-201ENST00000555741 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
AL049870.4-201ENST00000555741 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
AL049870.4-201ENST00000555741 APLP2Q06481 763 aa11.19□□□□□ -0.62
AL049870.4-201ENST00000555741 PKD2Q13563 968 aa11.19□□□□□ -0.62
AL049870.4-201ENST00000555741 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
AL049870.4-201ENST00000555741 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
AL049870.4-201ENST00000555741 FBLN2P98095 1184 aa11.1□□□□□ -0.63
AL049870.4-201ENST00000555741 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
AL049870.4-201ENST00000555741 BCANQ96GW7 911 aa11.06□□□□□ -0.64
AL049870.4-201ENST00000555741 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
AL049870.4-201ENST00000555741 POLA2Q14181 598 aa11.05□□□□□ -0.64
AL049870.4-201ENST00000555741 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
AL049870.4-201ENST00000555741 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
AL049870.4-201ENST00000555741 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
AL049870.4-201ENST00000555741 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
AL049870.4-201ENST00000555741 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
AL049870.4-201ENST00000555741 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
AL049870.4-201ENST00000555741 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
AL049870.4-201ENST00000555741 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
AL049870.4-201ENST00000555741 CAPN15O75808 1086 aa10.88□□□□□ -0.67
AL049870.4-201ENST00000555741 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
AL049870.4-201ENST00000555741 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
AL049870.4-201ENST00000555741 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
AL049870.4-201ENST00000555741 RGL2O15211 777 aa10.83□□□□□ -0.68
AL049870.4-201ENST00000555741 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
AL049870.4-201ENST00000555741 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
AL049870.4-201ENST00000555741 ABCB7O75027 752 aa10.8□□□□□ -0.68
AL049870.4-201ENST00000555741 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
AL049870.4-201ENST00000555741 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
AL049870.4-201ENST00000555741 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
AL049870.4-201ENST00000555741 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
AL049870.4-201ENST00000555741 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
AL049870.4-201ENST00000555741 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
AL049870.4-201ENST00000555741 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
AL049870.4-201ENST00000555741 MIER1Q8N108 512 aa10.67□□□□□ -0.7
AL049870.4-201ENST00000555741 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.7
AL049870.4-201ENST00000555741 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
AL049870.4-201ENST00000555741 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
AL049870.4-201ENST00000555741 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
AL049870.4-201ENST00000555741 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
AL049870.4-201ENST00000555741 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
AL049870.4-201ENST00000555741 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
AL049870.4-201ENST00000555741 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
AL049870.4-201ENST00000555741 DSG3P32926 999 aa10.59□□□□□ -0.71
AL049870.4-201ENST00000555741 HS6ST3Q8IZP7 471 aa10.54□□□□□ -0.72
AL049870.4-201ENST00000555741 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
AL049870.4-201ENST00000555741 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
AL049870.4-201ENST00000555741 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
AL049870.4-201ENST00000555741 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
AL049870.4-201ENST00000555741 NBR1Q14596 966 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms