Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AL049779.2-201ENST00000553847 315 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AC108359.1-201ENST00000616451 1211 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AP000648.2-201ENST00000624182 404 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AL049767.1-202ENST00000637826 242 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 CASC19-264ENST00000641912 1184 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 CASC19-221ENST00000641309 1382 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 AC093775.1-201ENST00000624154 1868 ntBASIC5.24□□□□□ -1.57
LRRC40Q9H9A6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 RNU6-697P-201ENST00000363348 107 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 MIR1182-201ENST00000408363 97 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 EI24P4-201ENST00000423683 1078 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 RPL12P11-201ENST00000439970 501 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AL591363.1-201ENST00000450091 483 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC002553.2-201ENST00000453217 340 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC091180.1-201ENST00000462104 372 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC020779.1-201ENST00000478757 796 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 IGKV3D-34-201ENST00000522638 302 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC011270.1-201ENST00000558606 583 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC004241.3-201ENST00000611728 517 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AP005212.4-201ENST00000614206 710 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 THAP12P5-201ENST00000405864 2275 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 SCARNA15-201ENST00000607520 4325 ntBASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC40Q9H9A6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 RN7SKP160-201ENST00000363804 340 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 RN7SKP16-201ENST00000410180 299 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC104333.2-201ENST00000422630 192 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 COX6CP13-201ENST00000428703 226 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 OR6C72P-201ENST00000451403 892 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 RN7SL174P-201ENST00000475578 289 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC005412.2-201ENST00000492004 341 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC134349.2-201ENST00000535136 910 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC024940.3-201ENST00000538551 316 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms