RNA–Protein interactions for RNA: ENST00000573319.1

BCAR4-204, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 5 BASIC

Gene BCAR4, Length 1,273 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-204ENST00000573319 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
BCAR4-204ENST00000573319 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
BCAR4-204ENST00000573319 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
BCAR4-204ENST00000573319 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
BCAR4-204ENST00000573319 FOXD1Q16676 465 aa19.88■□□□□ 0.77
BCAR4-204ENST00000573319 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
BCAR4-204ENST00000573319 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
BCAR4-204ENST00000573319 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
BCAR4-204ENST00000573319 ADRA2BP18089 450 aa18.81■□□□□ 0.6
BCAR4-204ENST00000573319 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
BCAR4-204ENST00000573319 MSH5O43196 834 aa18.48■□□□□ 0.55
BCAR4-204ENST00000573319 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
BCAR4-204ENST00000573319 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
BCAR4-204ENST00000573319 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
BCAR4-204ENST00000573319 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
BCAR4-204ENST00000573319 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
BCAR4-204ENST00000573319 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
BCAR4-204ENST00000573319 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
BCAR4-204ENST00000573319 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
BCAR4-204ENST00000573319 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
BCAR4-204ENST00000573319 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
BCAR4-204ENST00000573319 KCNA4P22459 653 aa16.22■□□□□ 0.19
BCAR4-204ENST00000573319 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
BCAR4-204ENST00000573319 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
BCAR4-204ENST00000573319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
BCAR4-204ENST00000573319 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
BCAR4-204ENST00000573319 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
BCAR4-204ENST00000573319 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
BCAR4-204ENST00000573319 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
BCAR4-204ENST00000573319 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
BCAR4-204ENST00000573319 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
BCAR4-204ENST00000573319 CAPN15O75808 1086 aa15.12■□□□□ 0.01
BCAR4-204ENST00000573319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
BCAR4-204ENST00000573319 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
BCAR4-204ENST00000573319 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
BCAR4-204ENST00000573319 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
BCAR4-204ENST00000573319 APLP2Q06481 763 aa15□□□□□ -0.01
BCAR4-204ENST00000573319 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
BCAR4-204ENST00000573319 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
BCAR4-204ENST00000573319 ZBTB22O15209 634 aa14.91□□□□□ -0.02
BCAR4-204ENST00000573319 DSG3P32926 999 aa14.9□□□□□ -0.02
BCAR4-204ENST00000573319 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
BCAR4-204ENST00000573319 POTEHQ6S545 545 aa14.86□□□□□ -0.03
BCAR4-204ENST00000573319 ABCB7O75027 752 aa14.8□□□□□ -0.04
BCAR4-204ENST00000573319 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
BCAR4-204ENST00000573319 POLA2Q14181 598 aa14.58□□□□□ -0.08
BCAR4-204ENST00000573319 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
BCAR4-204ENST00000573319 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
BCAR4-204ENST00000573319 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
BCAR4-204ENST00000573319 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.13
BCAR4-204ENST00000573319 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
BCAR4-204ENST00000573319 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
BCAR4-204ENST00000573319 FBLN2P98095 1184 aa14.08□□□□□ -0.16
BCAR4-204ENST00000573319 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
BCAR4-204ENST00000573319 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
BCAR4-204ENST00000573319 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
BCAR4-204ENST00000573319 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
BCAR4-204ENST00000573319 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
BCAR4-204ENST00000573319 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
BCAR4-204ENST00000573319 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
BCAR4-204ENST00000573319 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
BCAR4-204ENST00000573319 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
BCAR4-204ENST00000573319 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
BCAR4-204ENST00000573319 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
BCAR4-204ENST00000573319 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
BCAR4-204ENST00000573319 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
BCAR4-204ENST00000573319 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
BCAR4-204ENST00000573319 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
BCAR4-204ENST00000573319 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
BCAR4-204ENST00000573319 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
BCAR4-204ENST00000573319 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
BCAR4-204ENST00000573319 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
BCAR4-204ENST00000573319 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
BCAR4-204ENST00000573319 HAX1O00165 279 aa13.24□□□□□ -0.29
BCAR4-204ENST00000573319 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
BCAR4-204ENST00000573319 FKBP8Q14318 412 aa13.16□□□□□ -0.3
BCAR4-204ENST00000573319 PROM2Q8N271 834 aa13.15□□□□□ -0.3
BCAR4-204ENST00000573319 EVX2Q03828 476 aa13.08□□□□□ -0.32
BCAR4-204ENST00000573319 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
BCAR4-204ENST00000573319 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
BCAR4-204ENST00000573319 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
BCAR4-204ENST00000573319 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
BCAR4-204ENST00000573319 MIER1Q8N108 512 aa12.88□□□□□ -0.35
BCAR4-204ENST00000573319 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
BCAR4-204ENST00000573319 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
BCAR4-204ENST00000573319 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
BCAR4-204ENST00000573319 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
BCAR4-204ENST00000573319 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
BCAR4-204ENST00000573319 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
BCAR4-204ENST00000573319 GABBR2O75899 941 aa12.79□□□□□ -0.36
BCAR4-204ENST00000573319 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
BCAR4-204ENST00000573319 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
BCAR4-204ENST00000573319 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
BCAR4-204ENST00000573319 LHX8Q68G74 356 aa12.7□□□□□ -0.38
BCAR4-204ENST00000573319 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
BCAR4-204ENST00000573319 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
BCAR4-204ENST00000573319 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
BCAR4-204ENST00000573319 CLCN6P51797 869 aa12.62□□□□□ -0.39
BCAR4-204ENST00000573319 VASPP50552 380 aaPredicted RBP12.61□□□□□ -0.39
BCAR4-204ENST00000573319 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms