RNA–Protein interactions for RNA: ENST00000426646.1

TRAT1-202, Transcript of T cell receptor associated transmembrane adaptor 1, humanhuman

TSL 1 (best) BASIC

Gene TRAT1, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAT1-202ENST00000426646 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
TRAT1-202ENST00000426646 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
TRAT1-202ENST00000426646 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
TRAT1-202ENST00000426646 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
TRAT1-202ENST00000426646 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
TRAT1-202ENST00000426646 FOXD1Q16676 465 aa18.95■□□□□ 0.62
TRAT1-202ENST00000426646 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
TRAT1-202ENST00000426646 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
TRAT1-202ENST00000426646 ADRA2BP18089 450 aa17.83■□□□□ 0.45
TRAT1-202ENST00000426646 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
TRAT1-202ENST00000426646 MSH5O43196 834 aa17.62■□□□□ 0.41
TRAT1-202ENST00000426646 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
TRAT1-202ENST00000426646 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
TRAT1-202ENST00000426646 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
TRAT1-202ENST00000426646 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
TRAT1-202ENST00000426646 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
TRAT1-202ENST00000426646 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.11
TRAT1-202ENST00000426646 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
TRAT1-202ENST00000426646 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.09
TRAT1-202ENST00000426646 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
TRAT1-202ENST00000426646 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
TRAT1-202ENST00000426646 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
TRAT1-202ENST00000426646 KCNA4P22459 653 aa15.24■□□□□ 0.03
TRAT1-202ENST00000426646 RNF39Q9H2S5 420 aa15.08■□□□□ 0
TRAT1-202ENST00000426646 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
TRAT1-202ENST00000426646 POTEHQ6S545 545 aa15.02□□□□□ -0.01
TRAT1-202ENST00000426646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRAT1-202ENST00000426646 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
TRAT1-202ENST00000426646 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
TRAT1-202ENST00000426646 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
TRAT1-202ENST00000426646 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
TRAT1-202ENST00000426646 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
TRAT1-202ENST00000426646 CAPN15O75808 1086 aa14.28□□□□□ -0.12
TRAT1-202ENST00000426646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
TRAT1-202ENST00000426646 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
TRAT1-202ENST00000426646 DSG3P32926 999 aa14.19□□□□□ -0.14
TRAT1-202ENST00000426646 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
TRAT1-202ENST00000426646 APLP2Q06481 763 aa14.17□□□□□ -0.14
TRAT1-202ENST00000426646 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
TRAT1-202ENST00000426646 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
TRAT1-202ENST00000426646 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
TRAT1-202ENST00000426646 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
TRAT1-202ENST00000426646 ZBTB22O15209 634 aa14.03□□□□□ -0.16
TRAT1-202ENST00000426646 ABCB7O75027 752 aa13.98□□□□□ -0.17
TRAT1-202ENST00000426646 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
TRAT1-202ENST00000426646 POLA2Q14181 598 aa13.79□□□□□ -0.2
TRAT1-202ENST00000426646 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
TRAT1-202ENST00000426646 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
TRAT1-202ENST00000426646 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
TRAT1-202ENST00000426646 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
TRAT1-202ENST00000426646 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
TRAT1-202ENST00000426646 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
TRAT1-202ENST00000426646 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
TRAT1-202ENST00000426646 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
TRAT1-202ENST00000426646 FBLN2P98095 1184 aa13.24□□□□□ -0.29
TRAT1-202ENST00000426646 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
TRAT1-202ENST00000426646 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
TRAT1-202ENST00000426646 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
TRAT1-202ENST00000426646 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
TRAT1-202ENST00000426646 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
TRAT1-202ENST00000426646 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
TRAT1-202ENST00000426646 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
TRAT1-202ENST00000426646 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
TRAT1-202ENST00000426646 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
TRAT1-202ENST00000426646 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
TRAT1-202ENST00000426646 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
TRAT1-202ENST00000426646 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAT1-202ENST00000426646 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
TRAT1-202ENST00000426646 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAT1-202ENST00000426646 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
TRAT1-202ENST00000426646 HAX1O00165 279 aa12.69□□□□□ -0.38
TRAT1-202ENST00000426646 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
TRAT1-202ENST00000426646 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
TRAT1-202ENST00000426646 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
TRAT1-202ENST00000426646 LHX8Q68G74 356 aa12.57□□□□□ -0.4
TRAT1-202ENST00000426646 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
TRAT1-202ENST00000426646 EVX2Q03828 476 aa12.49□□□□□ -0.41
TRAT1-202ENST00000426646 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
TRAT1-202ENST00000426646 PROM2Q8N271 834 aa12.44□□□□□ -0.42
TRAT1-202ENST00000426646 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
TRAT1-202ENST00000426646 CREBZFQ9NS37 354 aa12.39□□□□□ -0.43
TRAT1-202ENST00000426646 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
TRAT1-202ENST00000426646 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
TRAT1-202ENST00000426646 FKBP8Q14318 412 aa12.24□□□□□ -0.45
TRAT1-202ENST00000426646 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
TRAT1-202ENST00000426646 GABBR2O75899 941 aa12.19□□□□□ -0.46
TRAT1-202ENST00000426646 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAT1-202ENST00000426646 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
TRAT1-202ENST00000426646 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
TRAT1-202ENST00000426646 MIER1Q8N108 512 aa12.06□□□□□ -0.48
TRAT1-202ENST00000426646 CLCN6P51797 869 aa12.04□□□□□ -0.48
TRAT1-202ENST00000426646 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
TRAT1-202ENST00000426646 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
TRAT1-202ENST00000426646 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
TRAT1-202ENST00000426646 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
TRAT1-202ENST00000426646 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
TRAT1-202ENST00000426646 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
TRAT1-202ENST00000426646 POTEMA6NI47 508 aa11.92□□□□□ -0.5
TRAT1-202ENST00000426646 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
TRAT1-202ENST00000426646 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms