Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.65□□□□□ -1.34
BHLHE41Q9C0J9 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
BHLHE41Q9C0J9 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.65□□□□□ -1.34
BHLHE41Q9C0J9 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 AL031651.1-201ENST00000615357 1438 ntBASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 LPAL2-203ENST00000454031 2498 ntBASIC6.65□□□□□ -1.35
BHLHE41Q9C0J9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC137056.2-201ENST00000624055 1958 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RPL9P21-201ENST00000392269 505 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 Y_RNA.598-201ENST00000410480 95 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC023141.1-201ENST00000419418 379 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TIMM9P3-201ENST00000428659 274 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 USP9YP12-201ENST00000450481 570 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC004692.1-201ENST00000455430 424 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RPL7P48-201ENST00000461513 746 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC013828.1-201ENST00000481845 158 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC079594.1-201ENST00000489757 331 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RN7SL182P-201ENST00000496499 300 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 MTCYBP17-201ENST00000503579 789 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 ARL4AP2-201ENST00000507378 601 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 OR10J9P-201ENST00000511932 987 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC024589.1-201ENST00000512207 263 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 SCARNA6-201ENST00000515982 265 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 SNORD39.2-201ENST00000579995 76 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC113361.1-201ENST00000606683 543 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL359880.1-201ENST00000621879 266 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 MAPK10-365ENST00000641902 3825 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CYP1D1P-201ENST00000416662 1433 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AL391262.1-201ENST00000556558 1992 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 AC100810.3-201ENST00000633189 2240 ntBASIC6.64□□□□□ -1.35
BHLHE41Q9C0J9 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms