RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 MYT1Q01538 1121 aa12.39□□□□□ -0.43
CNTN3-201ENST00000263665 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
CNTN3-201ENST00000263665 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
CNTN3-201ENST00000263665 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
CNTN3-201ENST00000263665 CENPBP07199 599 aaPredicted RBP10.87□□□□□ -0.67
CNTN3-201ENST00000263665 ZEB1P37275 1124 aaPredicted RBP10.72□□□□□ -0.69
CNTN3-201ENST00000263665 CCER1Q8TC90 406 aaPredicted RBP10.68□□□□□ -0.7
CNTN3-201ENST00000263665 HRCP23327 699 aa10.62□□□□□ -0.71
CNTN3-201ENST00000263665 NISCHQ9Y2I1 1504 aa10.57□□□□□ -0.72
CNTN3-201ENST00000263665 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
CNTN3-201ENST00000263665 SLC24A1O60721 1099 aa10.52□□□□□ -0.73
CNTN3-201ENST00000263665 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
CNTN3-201ENST00000263665 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
CNTN3-201ENST00000263665 PCGF6Q9BYE7 350 aa10.32□□□□□ -0.76
CNTN3-201ENST00000263665 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
CNTN3-201ENST00000263665 BCL11AQ9H165 835 aa10.27□□□□□ -0.77
CNTN3-201ENST00000263665 NEFLP07196 543 aa10.18□□□□□ -0.78
CNTN3-201ENST00000263665 CLSPNQ9HAW4 1339 aa10.16□□□□□ -0.78
CNTN3-201ENST00000263665 EIF5BO60841 1220 aaKnown RBP10.15□□□□□ -0.78
CNTN3-201ENST00000263665 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
CNTN3-201ENST00000263665 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
CNTN3-201ENST00000263665 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
CNTN3-201ENST00000263665 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
CNTN3-201ENST00000263665 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
CNTN3-201ENST00000263665 ANP32EQ9BTT0 268 aa10.07□□□□□ -0.8
CNTN3-201ENST00000263665 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
CNTN3-201ENST00000263665 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
CNTN3-201ENST00000263665 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
CNTN3-201ENST00000263665 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
CNTN3-201ENST00000263665 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
CNTN3-201ENST00000263665 APLP2Q06481 763 aa9.94□□□□□ -0.82
CNTN3-201ENST00000263665 DCAF1Q9Y4B6 1507 aa9.89□□□□□ -0.83
CNTN3-201ENST00000263665 DIEXFQ68CQ4 756 aaKnown RBP9.85□□□□□ -0.83
CNTN3-201ENST00000263665 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
CNTN3-201ENST00000263665 ZNF316A6NFI3 1004 aaPredicted RBP9.76□□□□□ -0.85
CNTN3-201ENST00000263665 FAM9AQ8IZU1 332 aaPredicted RBP9.75□□□□□ -0.85
CNTN3-201ENST00000263665 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
CNTN3-201ENST00000263665 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
CNTN3-201ENST00000263665 NEUROD1Q13562 356 aa9.71□□□□□ -0.85
CNTN3-201ENST00000263665 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
CNTN3-201ENST00000263665 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
CNTN3-201ENST00000263665 CHIC1Q5VXU3 224 aa9.68□□□□□ -0.86
CNTN3-201ENST00000263665 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
CNTN3-201ENST00000263665 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
CNTN3-201ENST00000263665 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
CNTN3-201ENST00000263665 ANP32AP39687 249 aaKnown RBP9.61□□□□□ -0.87
CNTN3-201ENST00000263665 TNNT2P45379 298 aaPredicted RBP9.59□□□□□ -0.87
CNTN3-201ENST00000263665 CSRNP3Q8WYN3 585 aa9.58□□□□□ -0.88
CNTN3-201ENST00000263665 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
CNTN3-201ENST00000263665 UBE2Q2Q8WVN8 375 aa9.55□□□□□ -0.88
CNTN3-201ENST00000263665 DEKP35659 375 aaKnown RBP9.51□□□□□ -0.89
CNTN3-201ENST00000263665 TRIM44Q96DX7 344 aaPredicted RBP9.49□□□□□ -0.89
CNTN3-201ENST00000263665 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
CNTN3-201ENST00000263665 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
CNTN3-201ENST00000263665 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
CNTN3-201ENST00000263665 POLR3GLQ9BT43 218 aa9.45□□□□□ -0.9
CNTN3-201ENST00000263665 BCANQ96GW7 911 aa9.44□□□□□ -0.9
CNTN3-201ENST00000263665 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
CNTN3-201ENST00000263665 NBR1Q14596 966 aa9.4□□□□□ -0.9
CNTN3-201ENST00000263665 HSP90AA1P07900 732 aaKnown RBP9.38□□□□□ -0.91
CNTN3-201ENST00000263665 PPM1GO15355 546 aaPredicted RBP9.37□□□□□ -0.91
CNTN3-201ENST00000263665 PTMSP20962 102 aa9.37□□□□□ -0.91
CNTN3-201ENST00000263665 ANP32BQ92688 251 aaKnown RBP9.37□□□□□ -0.91
CNTN3-201ENST00000263665 NEFMP07197 916 aa9.37□□□□□ -0.91
CNTN3-201ENST00000263665 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
CNTN3-201ENST00000263665 FKBP8Q14318 412 aa9.35□□□□□ -0.91
CNTN3-201ENST00000263665 PDE4CQ08493 712 aa9.35□□□□□ -0.91
CNTN3-201ENST00000263665 CNGB1Q14028 1251 aaPredicted RBP9.34□□□□□ -0.91
CNTN3-201ENST00000263665 NAP1L5Q96NT1 182 aaPredicted RBP9.33□□□□□ -0.92
CNTN3-201ENST00000263665 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
CNTN3-201ENST00000263665 NOP58Q9Y2X3 529 aaKnown RBP9.33□□□□□ -0.92
CNTN3-201ENST00000263665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.31□□□□□ -0.92
CNTN3-201ENST00000263665 ARXQ96QS3 562 aa9.31□□□□□ -0.92
CNTN3-201ENST00000263665 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
CNTN3-201ENST00000263665 ANO8Q9HCE9 1232 aaPredicted RBP9.31□□□□□ -0.92
CNTN3-201ENST00000263665 SUPT16HQ9Y5B9 1047 aaKnown RBP9.31□□□□□ -0.92
CNTN3-201ENST00000263665 LOC105371045A0A1W2PR82 267 aa9.31□□□□□ -0.92
CNTN3-201ENST00000263665 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
CNTN3-201ENST00000263665 HSP90AA2PQ14568 343 aaPredicted RBP9.3□□□□□ -0.92
CNTN3-201ENST00000263665 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
CNTN3-201ENST00000263665 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
CNTN3-201ENST00000263665 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
CNTN3-201ENST00000263665 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
CNTN3-201ENST00000263665 A0A0U1RQG5 324 aaPredicted RBP9.26□□□□□ -0.93
CNTN3-201ENST00000263665 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
CNTN3-201ENST00000263665 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
CNTN3-201ENST00000263665 L1TD1Q5T7N2 865 aaKnown RBP9.23□□□□□ -0.93
CNTN3-201ENST00000263665 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
CNTN3-201ENST00000263665 TAF7LQ5H9L4 462 aa9.21□□□□□ -0.93
CNTN3-201ENST00000263665 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
CNTN3-201ENST00000263665 ANP32CO43423 234 aa9.2□□□□□ -0.94
CNTN3-201ENST00000263665 MYO15BQ96JP2 1530 aa9.19□□□□□ -0.94
CNTN3-201ENST00000263665 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
CNTN3-201ENST00000263665 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
CNTN3-201ENST00000263665 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
CNTN3-201ENST00000263665 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
CNTN3-201ENST00000263665 HMGB1P09429 215 aaKnown RBP9.15□□□□□ -0.94
CNTN3-201ENST00000263665 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
CNTN3-201ENST00000263665 MIER1Q8N108 512 aa9.13□□□□□ -0.95
CNTN3-201ENST00000263665 ARID4BQ4LE39 1312 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms